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13_1_20cm_4_scaffold_1176_17

Organism: 13_1_20CM_4_Rokubacteria_70_14

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 1 ASCG 10 / 38
Location: 14870..15514

Top 3 Functional Annotations

Value Algorithm Source
ECF family RNA polymerase sigma factor Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 195.0
  • Bit_score: 304
  • Evalue 1.20e-79
ECF subfamily RNA polymerase sigma factor id=4197918 bin=GWC2_Methylomirabilis_70_24 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 65.6
  • Coverage: 215.0
  • Bit_score: 276
  • Evalue 2.60e-71
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 40.0
  • Coverage: 195.0
  • Bit_score: 139
  • Evalue 1.10e-30

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 645
GTGGCATCGCGAGAGGAGAGGGTGTTGTCTTCCAAGGTGGCGAAGGACATCAGCGCGCGGGTGGACGCCGACGCCGGACTGATGGAGGCGCTGCGCCGGGACGATCCCGCCGCCGCCGATCAGCTCGTCGAGCGCTACGGCGACCGGGTCTACCGGCTGGCCATGCGCATCACCGGCGTGAAGGAAGACGCCGAGGAAGCCGCCCAGGACGCGCTGTGGACGGCCGCCCGCAAGATCGACATGTTCAGGGGCGAGTCGGCGTTCGGCTCCTGGATCTACCGGATCACCGCCAACGCGGCGTACCAGAAGCTTCGGACGCGCCGGCGGACGGCCAACGAGGTCGCGCTGGACGACGTGCTGCCCTCGTTCGACAGCGACGGCCGGCACTTCGAGCCGATGGACGACTGGTCGAACCGGGTCGACGAGCAGGCCCTGCAGGGCGAGCTGCGCCAGGTCCTGACCGCCGCGATCGACGCGCTGCCGGTGGACTACCGGACCGCGCTGGCCCTGCACGACGTCGAGGGCGTGTCGAACCCCGACATCGCCGAGACGCTTGGCATCAGCCTGGCGGCGGTGAAGTCGCGCGTGCACCGCTCGCGGTTGTTCGTGCGCAAGCGCCTGTCCGAGTACCTCAAGTCTGCCTAG
PROTEIN sequence
Length: 215
VASREERVLSSKVAKDISARVDADAGLMEALRRDDPAAADQLVERYGDRVYRLAMRITGVKEDAEEAAQDALWTAARKIDMFRGESAFGSWIYRITANAAYQKLRTRRRTANEVALDDVLPSFDSDGRHFEPMDDWSNRVDEQALQGELRQVLTAAIDALPVDYRTALALHDVEGVSNPDIAETLGISLAAVKSRVHRSRLFVRKRLSEYLKSA*