ggKbase home page

13_1_20cm_4_scaffold_224_19

Organism: 13_1_20CM_4_Rokubacteria_70_14

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 1 ASCG 10 / 38
Location: comp(16312..16821)

Top 3 Functional Annotations

Value Algorithm Source
pyridoxal-phosphate dependent TrpB-like enzyme; K06001 tryptophan synthase beta chain [EC:4.2.1.20] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated UNIPROT
DB: UniProtKB
  • Identity: 92.3
  • Coverage: 169.0
  • Bit_score: 321
  • Evalue 1.00e-84
pyridoxal-phosphate dependent TrpB-like enzyme; K06001 tryptophan synthase beta chain [EC:4.2.1.20] id=14627587 bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 170.0
  • Bit_score: 295
  • Evalue 4.20e-77
tryptophan synthase subunit beta similarity KEGG
DB: KEGG
  • Identity: 65.9
  • Coverage: 167.0
  • Bit_score: 250
  • Evalue 3.40e-64

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 510
AAGAAGCTCCGCGTCGTCGCCGTCGAGCCGAGCGCCTGTCCGAGCCTCACGAAGGGCAAGTACGTCTACGACTTTGGCGACACGGTCGGCCTCACGCCGCTCGTCAAGATGTACACGCTCGGCCACACCTTCATTCCGCCGTCGCTCCACGCGGGCGGTCTCCGCTACCACGGCATGGCGCCCTTGATCTGCAAGCTCTACGACGAGAAGGTCATCGAGGCGATCGCCGTGCCACAGGTCGCCACCTTCCACGCCGCCGTGCAGTTCGCGCGGGCGGAGGGCCTCCTGCCCGCACCCGAGGCGGCCCACGCCGTGCGCGGGGCCATCGACGAGGCGCTCCGGTGCAAGAGCGAGGGCAAGCGGAAGACGATCGTCTTCAACCTGTGCGGCCACGGTCATCTCGACCTCTCGGCCTACGAGGCGTTTCTCGCGGGCAAGCTCCAGGACTACGAGTACCCCGCCGAGAAGGTCCAGGAGGCGCTCAAGCACCTGCCGAAGGTGAAGGCGTAG
PROTEIN sequence
Length: 170
KKLRVVAVEPSACPSLTKGKYVYDFGDTVGLTPLVKMYTLGHTFIPPSLHAGGLRYHGMAPLICKLYDEKVIEAIAVPQVATFHAAVQFARAEGLLPAPEAAHAVRGAIDEALRCKSEGKRKTIVFNLCGHGHLDLSAYEAFLAGKLQDYEYPAEKVQEALKHLPKVKA*