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13_1_20cm_4_scaffold_53486_12

Organism: 13_1_20CM_4_Rokubacteria_70_14

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 1 ASCG 10 / 38
Location: 7977..8465

Top 3 Functional Annotations

Value Algorithm Source
sigW5; ECF subfamily RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWC2_Rokubacteria_70_16_curated UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 163.0
  • Bit_score: 217
  • Evalue 1.20e-53
ECF subfamily RNA polymerase sigma factor id=4751264 bin=GWC2_Methylomirabilis_70_16 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 66.9
  • Coverage: 163.0
  • Bit_score: 217
  • Evalue 8.20e-54
ECF subfamily RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 166.0
  • Bit_score: 131
  • Evalue 1.70e-28

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Taxonomy

GWC2_Rokubacteria_70_16_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 489
ATGGCGGCGGAGTGTCTCGTCACCCGGTACGGCGAGCGGGCGTATCGGCTGGCTCGCCGCATCACCGGCAATGGCCAGGATGCGGAGGAGGTCGTGCAGGACGCCTTCTGGACCGTGGTGCGAAAGATCGACACCTTCCGCGGCGAGTCGGCATTCGGGTCCTGGCTCTACCGCATCGTGGCGAACGCCGCCTACCAGAAGCTCCGCGGCCGGCCGGGCGGCCGGCGAGAGCTCTCGCTGGACGAGCTGCTGCCGTTCTTCGACGAGAGCGGTCGCGTCACGCCCACGGCCGACTGGTCGCCGCGCGTGGACGATCCTTCGCTCCAGGCCGAGCTGCGGACGGCGGTGACCGCGGCGATCGACGAATTGCCCGCCGCCTACCGGATCGCGTTCGTGCTGCGCGACGTCGAGGGGCGGTCAAATCTCGAGATCGCGGAGGCCCTCGGGCTCAGCGTCCCCCTCGTGAAGACGCGCGTGCATCGCGCGCGG
PROTEIN sequence
Length: 163
MAAECLVTRYGERAYRLARRITGNGQDAEEVVQDAFWTVVRKIDTFRGESAFGSWLYRIVANAAYQKLRGRPGGRRELSLDELLPFFDESGRVTPTADWSPRVDDPSLQAELRTAVTAAIDELPAAYRIAFVLRDVEGRSNLEIAEALGLSVPLVKTRVHRAR