ggKbase home page

13_1_20cm_4_scaffold_4181_10

Organism: 13_1_20CM_4_Actinobacteria_68_12

partial RP 8 / 55 BSCG 11 / 51 ASCG 6 / 38
Location: comp(5530..6717)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, Fis family n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LEX1_SYNFM similarity UNIREF
DB: UNIREF100
  • Identity: 38.1
  • Coverage: 168.0
  • Bit_score: 104
  • Evalue 3.20e-19
ECF subfamily RNA polymerase sigma-24 subunit Tax=RBG_16_Actinobacteria_68_12_curated UNIPROT
DB: UniProtKB
  • Identity: 56.2
  • Coverage: 153.0
  • Bit_score: 169
  • Evalue 1.10e-38
Fis family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 38.1
  • Coverage: 168.0
  • Bit_score: 104
  • Evalue 9.10e-20

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1188
ATGGAGGCAGCCAGGGCGGCGCCGGGCGGGCGTCGTAAAAACCTGTCTCTGAAGCTCGCGCCGAGGGCACGGCGCCAGAAGGAAACGTTCGACGCTGCCTTCGAGGGCTTCTATCGCGAGCACGTCGCCGAGGTCTACCAGTACGCCCTCGCAGTTCTGGGCAGTTCCGCGGACGCGGAGGACGTCACCCAGCAGACGTTCCTGAACGCCTACCGGGCGTTCCAGCGGGGCGAGCGGCCCAAGAAGGCGCACAACTGGCTGATCAAGATCGCGCACAACGTTTGCCGAATGCGCTGGCGCCAGTCGGGCCGTCGGCCGCAAGAGGTCCCGCTCGAGCGCGCAGGCGAGCCGGTCGCGCCCGACGACGAGAGGCCCTCGCTCGACGTGCTCCTGAGTGCGCTTGCGAAGCTGCCCTTCAACCAGCGCGCCGCGATCGTGATGCGCGAGGGCGAGGATCGCAGCTACGCAGAGATTGCCGAAGTGCTCGGTGTCACCGTGCCGGCGGTCGAGGCTCTGCTCTTCCGGGCCCGCGGCAATCTGCGCGAGCGGCGAAAGGCGCTGGCGGGCGCGCTCAGTGTTGCCCCGGTTCCGACTTCGCTCGGGTCCTTCTTCGGCGGCGGCGGCGGTGGCCTCATCGCGGCCGGCGGAACCGCTCTTGGCTCGCAGTTCCTGCTCAAAGCCGCTGCGCTTGTCGCAACGAGCGTCGTCGTCGGGGGCTTGGGTTTCAAGGCGGTCAGCGCTGTCGCTACGCCTGATCCGCCGACGTCTCGCCTTCAGCAGCTCCAAGGTCAGGCACGGCTCTTTGCCCCAAACGTCCTACGCGGGCCGGAGTCTGGCAATCCGAAGCGCTCTGTCGACGTCTCGGCCTTCCGGCACCCGTTGCGCGCCGTCTCCGGAGACGGCGCGCTCAGCGGCCCGCCCACCAACGACCCGTCCGAGATCGGCGGCGTCCCCGGGGTCGCTCAGCCCGTAGGCGGGACGTCCGCGATTTCGGCGGTCTCCACCTCGCCGACGGCCACTGTCGGCAGCGTTGTGGCCGCGGTGCCGACGGTGCCCGCAGTGCCGACGGTGCCCGCAGCGCCGCCTGTACCGACTGTCCCGCCTGCCGTGACCGTGACGACTCCTGTCACATCCGCGACGGTCACAGTGCCGACGCTTCCGGTCCCGCCGCCGCCGACACTGCCCTAA
PROTEIN sequence
Length: 396
MEAARAAPGGRRKNLSLKLAPRARRQKETFDAAFEGFYREHVAEVYQYALAVLGSSADAEDVTQQTFLNAYRAFQRGERPKKAHNWLIKIAHNVCRMRWRQSGRRPQEVPLERAGEPVAPDDERPSLDVLLSALAKLPFNQRAAIVMREGEDRSYAEIAEVLGVTVPAVEALLFRARGNLRERRKALAGALSVAPVPTSLGSFFGGGGGGLIAAGGTALGSQFLLKAAALVATSVVVGGLGFKAVSAVATPDPPTSRLQQLQGQARLFAPNVLRGPESGNPKRSVDVSAFRHPLRAVSGDGALSGPPTNDPSEIGGVPGVAQPVGGTSAISAVSTSPTATVGSVVAAVPTVPAVPTVPAAPPVPTVPPAVTVTTPVTSATVTVPTLPVPPPPTLP*