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13_1_20cm_4_scaffold_1135_6

Organism: 13_1_20CM_4_Actinobacteria_69_9

partial RP 30 / 55 MC: 2 BSCG 35 / 51 ASCG 12 / 38 MC: 1
Location: 3163..3615

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 factor n=1 Tax=Rhodococcus equi NBRC 101255 = C 7 RepID=U5DRV4_COREQ similarity UNIREF
DB: UNIREF100
  • Identity: 46.4
  • Coverage: 153.0
  • Bit_score: 108
  • Evalue 6.50e-21
RNA polymerase ECF-type sigma factor Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated UNIPROT
DB: UniProtKB
  • Identity: 43.5
  • Coverage: 147.0
  • Bit_score: 117
  • Evalue 1.50e-23
RNA polymerase sigma24 factor similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 151.0
  • Bit_score: 106
  • Evalue 7.00e-21

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 453
ATGACGTTGCCGCCGTTCGAACGCTTCTACGACGAGCACAAGGAGGAGATCTACGCCTTCCTCGTGCGCCGGCTCGGACGCGAGCGCGCCGAGGACGCGTTCCAGGAGACCTTCCTCCGCGCCCTGCGTGCGTATCCGAAGCTCCGTCACGGCGAGCACCTGCGCGCGTGGGCGTACACGATCGCGAGCAGGATCGCAATCGACGAGCACCGGCGTCCCCGCGCCGACGCCGACCTGCCCGAGCTCGCGTCGCTCGACGGCCGCCCGGCGTTCGCGCAGCTCGAGCACCTCGCCGACGAGCTGCCGCCGACCGAGCGCGCCGCCGTCGTGCTGCGCTATGGCTACGACCTCGATTACGCCGACATCGGCGCCGCGCTCGGCTCGAATGCCACCGCCGCGCGACAGGCCGCCTCGGCAGGCATCCGCAGACTCCGACGAAAGGAACGCCGATGA
PROTEIN sequence
Length: 151
MTLPPFERFYDEHKEEIYAFLVRRLGRERAEDAFQETFLRALRAYPKLRHGEHLRAWAYTIASRIAIDEHRRPRADADLPELASLDGRPAFAQLEHLADELPPTERAAVVLRYGYDLDYADIGAALGSNATAARQAASAGIRRLRRKERR*