ggKbase home page

13_1_20cm_4_scaffold_1135_8

Organism: 13_1_20CM_4_Actinobacteria_69_9

partial RP 30 / 55 MC: 2 BSCG 35 / 51 ASCG 12 / 38 MC: 1
Location: comp(4172..4537)

Top 3 Functional Annotations

Value Algorithm Source
cupin domain-containing protein Tax=RBG_16_RIF_CHLX_70_13_curated UNIPROT
DB: UniProtKB
  • Identity: 52.5
  • Coverage: 122.0
  • Bit_score: 138
  • Evalue 5.10e-30
cupin id=14629867 bin=bin8_Chloro species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin8_Chloro organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 122.0
  • Bit_score: 128
  • Evalue 4.90e-27
cupin domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 44.2
  • Coverage: 95.0
  • Bit_score: 88
  • Evalue 1.60e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_RIF_CHLX_70_13_curated → RIF-CHLX → Bacteria

Sequences

DNA sequence
Length: 366
GTGAGCGGCTTCGACGATCTTTCTTCCGTCGATCTGCAGCGGATCTGGGACGGGGTGCACGGGCGAGTCGTCCACGGTGAGCGGCTGACGTTCAGCGTCGTCGAGCTCGATCCCGACAGCGTCGTCCCCGAGCACGCGCACGAGCAGGAGCAGCTCGGCATGGTCCTCAAAGGTTCGCTCGCGTTTCGCATCGCCGACGAGACCCAGGAGCTCGGGCCGGGCGCGACGTGGGCGATCCCGGGCAACATGCCGCACGAGGTGCACGTCGGGCCGGAGGGCGCGATCGTGATCGACGTGTTCGCGCCGACGCGTGACGACTGGCGCGACGCTCCGCGCGTCGAGGCACGCGCTCCTCGCTGGCCCTAA
PROTEIN sequence
Length: 122
VSGFDDLSSVDLQRIWDGVHGRVVHGERLTFSVVELDPDSVVPEHAHEQEQLGMVLKGSLAFRIADETQELGPGATWAIPGNMPHEVHVGPEGAIVIDVFAPTRDDWRDAPRVEARAPRWP*