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13_1_20cm_4_scaffold_48_30

Organism: 13_1_20CM_4_Actinobacteria_69_9

partial RP 30 / 55 MC: 2 BSCG 35 / 51 ASCG 12 / 38 MC: 1
Location: comp(28550..29158)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family Tax=RBG_19FT_COMBO_Armatimonadetes_69_19_curated UNIPROT
DB: UniProtKB
  • Identity: 38.4
  • Coverage: 177.0
  • Bit_score: 125
  • Evalue 7.40e-26
RNA polymerase sigma factor, sigma-70 family id=24480312 bin=RBG_19FT_COMBO_GAL15_69_19 species=Streptomyces griseoaurantiacus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate similarity UNIREF
DB: UNIREF100
  • Identity: 38.4
  • Coverage: 177.0
  • Bit_score: 126
  • Evalue 4.10e-26
RNA polymerase ECF-type sigma factor similarity KEGG
DB: KEGG
  • Identity: 38.2
  • Coverage: 186.0
  • Bit_score: 125
  • Evalue 2.00e-26

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Taxonomy

RBG_19FT_COMBO_Armatimonadetes_69_19_curated → Armatimonadetes → Bacteria

Sequences

DNA sequence
Length: 609
ATGCAACTGCCGCGAAGCCGCCGCCGTCCAATTCAGCAGTCCTTCCGACCCGAAGGGCCACTGGTCTATGCACGGCTGAGCGATCCGATCCTGGTCAAAAGGGCAAAAGACGGCGACACGCGCGCGCTCGAGGTGCTGTGCGAACGGCACGCCGCGCGCGTGGACAAGGTCGCGTTCCACATCCTGCGCGATCCGGAGGATGCGCGCGACGCCGCCCAGGAGGCGCTCGCGAAGCTCTGCACGCGAATCGGGCAGTTCCGGGGCGAGGCTCAGTTCGCGACGTGGCTGCACCGGCTCACGATCAACGCGTGCCGCGACGTCGCGAACCGCCAGCGTGCCCGGGCCTGCGAGCCGCTGCTCGAGGATCGCCGCGCGGCGACCGACGCCGATCCCGTCCACGAGGCGGACCGCAGCGAGCTGCGCAGCGAGTTGAGCCGCTGCCTCGCCGAGATCGCGCCGGACCAGGCACGGGTCGTCGTGCTCAAGGACGCGCTCGGGCTGTCCTTCGAGGAGATCGCGGCGGTTTCCGACATGCCCGTCGGCACCGCGAAGTGCTATGCGCATCGCGGCCGGAACCGGTTGCGCGACAAGCTTTCCGACGTCGGATGA
PROTEIN sequence
Length: 203
MQLPRSRRRPIQQSFRPEGPLVYARLSDPILVKRAKDGDTRALEVLCERHAARVDKVAFHILRDPEDARDAAQEALAKLCTRIGQFRGEAQFATWLHRLTINACRDVANRQRARACEPLLEDRRAATDADPVHEADRSELRSELSRCLAEIAPDQARVVVLKDALGLSFEEIAAVSDMPVGTAKCYAHRGRNRLRDKLSDVG*