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13_1_20cm_2_scaffold_2448_5

Organism: 13_1_20CM_2_Rokubacteria_70_7

partial RP 17 / 55 MC: 1 BSCG 11 / 51 ASCG 7 / 38
Location: comp(4152..4883)

Top 3 Functional Annotations

Value Algorithm Source
16S ribosomal RNA methyltransferase RsmE; K09761 16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated UNIPROT
DB: UniProtKB
  • Identity: 60.5
  • Coverage: 253.0
  • Bit_score: 278
  • Evalue 8.30e-72
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KCC6_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 43.0
  • Coverage: 251.0
  • Bit_score: 185
  • Evalue 8.70e-44
RNA methyltransferase, RsmE family similarity KEGG
DB: KEGG
  • Identity: 43.0
  • Coverage: 251.0
  • Bit_score: 185
  • Evalue 2.50e-44

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 732
ATGAGCGCCCTGCGGCGGTTCACGATCGCCCCCGGGCGGATCGACGGCGACCGCGTCGTCTTCGACCGCGACGAAACGCGCCACATGGCGGGGGTCTTACGATTGGCGCCGGGCGACCTCGTCGTCGCCGCCGATGGGCGCGGCCGCGATTACACCGTGCGCATCGAGTCGCTCGGTGAGACGGCCACCGGCACGGTGCTCGGCGTGGCCACCAACCGCGCCGAGCCCGCGCTGGCGATCACGCTCGTCCAGGGCGTTCCCAAAGGCGACAAGATGGAGCTGATCGTGCGGGCGGCCACCGAGCTCGGCGTGGCGCGGGGGCTGCCGGCGATCACAGAGCGCACCATCGTCCGCCTGGAGCCGAGTCGCTGGCGGGAGCGCGCGCGCCGGTGGCAGCGGGTGGCCAAGGACCCTCTCGCCGAGTGGCTGGAGGTGCCCGCCGGCGCGGCTGAGCTGAGGCTTTGCCTCTGGGAGGGCGAGGCGCTGCCGCTGGCGCGCGCGCTGGAGGCGGTGGCGCCGCCGCCGCGGGTGGCGCTGGTGCTCGTCGGCCCCGAGGGCGGGCTGGCGCGCCGCGAGGTCGAGCTGGCGCGGGCGCAGGGATGGACGGCCGCCCGGCTCGGTCCGCGCATCCTGCGTACCGAGACGGCGGGCCCGGCCATCGCCGCCATTCTTCAATTCAGATTCGGCGACCTCGGTGGCGGATCGACGGCCGCGGAGCCCATTCGTGACTGA
PROTEIN sequence
Length: 244
MSALRRFTIAPGRIDGDRVVFDRDETRHMAGVLRLAPGDLVVAADGRGRDYTVRIESLGETATGTVLGVATNRAEPALAITLVQGVPKGDKMELIVRAATELGVARGLPAITERTIVRLEPSRWRERARRWQRVAKDPLAEWLEVPAGAAELRLCLWEGEALPLARALEAVAPPPRVALVLVGPEGGLARREVELARAQGWTAARLGPRILRTETAGPAIAAILQFRFGDLGGGSTAAEPIRD*