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13_1_20cm_2_scaffold_2748_3

Organism: 13_1_20CM_2_Rokubacteria_70_7

partial RP 17 / 55 MC: 1 BSCG 11 / 51 ASCG 7 / 38
Location: 1856..2329

Top 3 Functional Annotations

Value Algorithm Source
Type IV pilus biogenesis protein n=1 Tax=Pseudomonas viridiflava UASWS0038 RepID=K6BC55_PSEVI similarity UNIREF
DB: UNIREF100
  • Identity: 31.1
  • Coverage: 164.0
  • Bit_score: 71
  • Evalue 1.20e-09
Type IV pilus biogenesis protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated UNIPROT
DB: UniProtKB
  • Identity: 48.4
  • Coverage: 159.0
  • Bit_score: 140
  • Evalue 2.30e-30
general secretion pathway protein H similarity KEGG
DB: KEGG
  • Identity: 30.9
  • Coverage: 162.0
  • Bit_score: 67
  • Evalue 3.80e-09

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 474
GTGGTATCTCGCGGCATTTACCGGCTGAACCGGAACGGCTTCACGGCAGCCGAGCTGCTGGTCGTCATCGCCATTGTGGCCGTCATGGCCGTGGTGTCGCTGCCGACTCTGATCGGCTACATGAGAGCTGCAGGCGCGAAAGCGACGGCCGAGGAGCTGGCCGCGGGAATCAACCGTGGCCGGCAACTGGCCATCTCGCAGAACCAGACGGTGTGCGTGGAGGTGGTCGGCAACCAGTACCGCTATCGCCTCAGCACCTGCGGCGGAGCGATCTGGTCGGGACCCGGCACCGACGCCAACGGCTTCTTGACGCTCGCCAACAATCTCACGCTGGCAACGAACGCGAACCCGGTGTTCAGTAATCTCGGCGCGGCGACGACCGCCGCCAACCTTACTGTCACCACGAACTATCCCAGCGGCAACATCACGCGGACCGTCGTCGTCTCCGCTTCGGGACGAGTGCAGATTCAGTGA
PROTEIN sequence
Length: 158
VVSRGIYRLNRNGFTAAELLVVIAIVAVMAVVSLPTLIGYMRAAGAKATAEELAAGINRGRQLAISQNQTVCVEVVGNQYRYRLSTCGGAIWSGPGTDANGFLTLANNLTLATNANPVFSNLGAATTAANLTVTTNYPSGNITRTVVVSASGRVQIQ*