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13_1_20cm_2_scaffold_28176_1

Organism: 13_1_20CM_2_Rokubacteria_70_7

partial RP 17 / 55 MC: 1 BSCG 11 / 51 ASCG 7 / 38
Location: 2..169

Top 3 Functional Annotations

Value Algorithm Source
C4-dicarboxylate ABC transporter n=1 Tax=Variovorax paradoxus RepID=UPI00037A80EE similarity UNIREF
DB: UNIREF100
  • Identity: 85.2
  • Coverage: 54.0
  • Bit_score: 108
  • Evalue 3.10e-21
TRAP C4-dicarboxylate transport system permease DctM Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated UNIPROT
DB: UniProtKB
  • Identity: 94.5
  • Coverage: 55.0
  • Bit_score: 117
  • Evalue 7.20e-24
fcbTl1; TRAP-type mannitol/chloroaromatic compound transport system, large permease similarity KEGG
DB: KEGG
  • Identity: 83.6
  • Coverage: 55.0
  • Bit_score: 108
  • Evalue 8.80e-22

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Taxonomy

RLO_Deltaproteobacteria_60_19 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 168
GCGATGTCGGCGTTCTATCTCAAGGGCGTGTCGCCGAAGCACGTCACGCTGAATCAGATCTTCGCGGGGATGATGCCGTACATGATCATCGTCTGCATCTGCCTGGTGTTCATGTACATCTGGCCGGGCATGACCCTCTGGCTCCCGGAGTTTCTCTACGGAAAGTAA
PROTEIN sequence
Length: 56
AMSAFYLKGVSPKHVTLNQIFAGMMPYMIIVCICLVFMYIWPGMTLWLPEFLYGK*