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13_1_20cm_2_scaffold_5440_16

Organism: 13_1_20CM_2_Rokubacteria_70_7

partial RP 17 / 55 MC: 1 BSCG 11 / 51 ASCG 7 / 38
Location: comp(10016..10594)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5ML72_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 38.4
  • Coverage: 190.0
  • Bit_score: 124
  • Evalue 1.40e-25
rpoE; RNA polymerase, sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 190.0
  • Bit_score: 269
  • Evalue 3.00e-69
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 37.9
  • Coverage: 190.0
  • Bit_score: 122
  • Evalue 1.20e-25

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Taxonomy

R_Rokubacteria_69_13 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 579
GTGGAGCCCACCGATGAGCTGCTGTGCCGCCGGATCGCCGAGAGGGACGAGGCGGCGTTCGATCTCCTGGTCACGCGCTACCAGCAGCGCGCCTACCGTCTGGCGTGGTCCATCCTGCGCGACGCCGAGGAGGCGCGTGACGTCTCCCAGGAGGCGTTCGTCCGGCTCTATCAGATGGCGGGCAGCTTCGCCGGCCGCTCGCGCTTTTCGACCTGGTTCTACCGGATCCTCGTCAACCTCTGTCTGGATCACCGCCGCCGCCATCGCTGGTGGCAGCGGTTCGTCCAGGCCGGAGAGTCCGACCCGTCCGATGACGAGCTGGACCGCTCGGTTCTGGACGGTCGGTCGGCGCTGACGGTGGATCCCATCGAGGTGCTGGACCGGGAGCAGAGGATGAAGCGCGTCTGGGAGGCGGTGGACACGCTCTCGCCGCAGCAGCGCGCGGCGGTGCTCCTCCAGGTGCAAGAGGAGCTGCCGACCCGCGAGATCGCCGCAGTCCTCAAGTGCTCGGAGGCCACGGTACGCGTCCACCTTCACCGGGCGCTGGCCACGCTCAGGAAGACGGTGGGAAAGGGCTGA
PROTEIN sequence
Length: 193
VEPTDELLCRRIAERDEAAFDLLVTRYQQRAYRLAWSILRDAEEARDVSQEAFVRLYQMAGSFAGRSRFSTWFYRILVNLCLDHRRRHRWWQRFVQAGESDPSDDELDRSVLDGRSALTVDPIEVLDREQRMKRVWEAVDTLSPQQRAAVLLQVQEELPTREIAAVLKCSEATVRVHLHRALATLRKTVGKG*