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13_1_20cm_2_scaffold_12431_10

Organism: 13_1_20CM_2_Rokubacteria_69_58

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(9245..9772)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C6H5_SPHTD similarity UNIREF
DB: UNIREF100
  • Identity: 42.9
  • Coverage: 156.0
  • Bit_score: 115
  • Evalue 4.70e-23
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWC2_Rokubacteria_70_16_curated UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 177.0
  • Bit_score: 229
  • Evalue 3.20e-57
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 42.9
  • Coverage: 156.0
  • Bit_score: 115
  • Evalue 1.30e-23

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Taxonomy

GWC2_Rokubacteria_70_16_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGGACGCAGAAGGCTTCGATACCCTGGTGGCGACGCACCACCGGGAGATCTATCGCTACCTCGTCCGGGCTACGTTCCGGGCCAGCGAGGCGGACGATCTCGCCCAGGAGACCTTCCTCCGCGCCTACCGCGCCCACCGGGCGCTCCCCCCCGACGCGAACGCACGCGCCTGGCTGTTCGCCATCGCGAGCAACGTCGCGAAGAACCACTTCCGCGCCGAGTCCCGTCGCCGCCGGGCTCACACCGGGGTGAGGGAGATCCGCATCGAGACCGACGGGGCGGGACCCGAGGGCGAGACGCTGTTCAAAGAGGCCCGGACCGTGCTCGACACCGTCGTCGCCGGATTGCCGCTCAAGCAGCGCCTCGCGTTCACCCTTCGGAAGGTCCACGACCTCGACTACGACGCCATCGGCCGGAGCCTCGCCTGCTCCCCGGACAGCGCGCGGGCCCACGTGTTCCAGGCCCTCCGCAAGATCCGTCGGAGCCTGAACGGGTACGAGCTGCCGGTGGGGAGAGACGAGCGATGA
PROTEIN sequence
Length: 176
MDAEGFDTLVATHHREIYRYLVRATFRASEADDLAQETFLRAYRAHRALPPDANARAWLFAIASNVAKNHFRAESRRRRAHTGVREIRIETDGAGPEGETLFKEARTVLDTVVAGLPLKQRLAFTLRKVHDLDYDAIGRSLACSPDSARAHVFQALRKIRRSLNGYELPVGRDER*