ggKbase home page

13_1_20cm_2_scaffold_12475_8

Organism: 13_1_20CM_2_Rokubacteria_69_58

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(5082..5621)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAA2_SPHTD similarity UNIREF
DB: UNIREF100
  • Identity: 37.5
  • Coverage: 184.0
  • Bit_score: 102
  • Evalue 4.20e-19
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG93808.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;" UNIPROT
DB: UniProtKB
  • Identity: 36.0
  • Coverage: 200.0
  • Bit_score: 109
  • Evalue 3.70e-21
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 36.0
  • Coverage: 200.0
  • Bit_score: 109
  • Evalue 7.50e-22

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 540
GTGAGCCAGCCGAAACGTCTTAGTCAAGATGAGGAGCGGTCGCTCCTGCGTCGCTTGCGAGCGCGGGACGAGCGGGCGCTGGCGGAGCTCTACGACCAGGTGGCCCCCTGGGTGCTCGGCGTCGCCTTCCGTATCCTGCAGGACGAGGCCGAAGCCGAGGACGTCGTGGGCGACGTGTTCCAGCAGGTGTGGCGGCACATCGATCAGCACGACGCGCGGCGTGGACCGCTCGTGCCGTGGATCCTTTCGATCGCCCGCAACCGGGCGCTCGACGCATTGCGGCGCCGCCGCCGCTGGTGGCGCAAGGCGGAGCGCTGGGAGCGCGCGCGGGAGGCGGCCGCGGAGGACGTGGTCGGCGCGCATGCGCCGTTCGAGGGATCGGTGGCGGGGTGGCCGTTGCACCGCGAGGTCCACGCAGCGCTCCACAGCGAGATCGCCCGGCGGCTGGGCCAACCGCTCGGCACGGTGAAGACACGGCTGCGGATCGCGCACCAGAAGTTGACGGAAGCGCTGCAGCACCTCAAGGATTGGATGATATGA
PROTEIN sequence
Length: 180
VSQPKRLSQDEERSLLRRLRARDERALAELYDQVAPWVLGVAFRILQDEAEAEDVVGDVFQQVWRHIDQHDARRGPLVPWILSIARNRALDALRRRRRWWRKAERWERAREAAAEDVVGAHAPFEGSVAGWPLHREVHAALHSEIARRLGQPLGTVKTRLRIAHQKLTEALQHLKDWMI*