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13_1_20cm_2_scaffold_30482_1

Organism: 13_1_20CM_2_Rokubacteria_69_58

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 3..1652

Top 3 Functional Annotations

Value Algorithm Source
rpoC; RNA polymerase, beta prime subunit (EC:2.7.7.6) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated UNIPROT
DB: UniProtKB
  • Identity: 92.4
  • Coverage: 550.0
  • Bit_score: 997
  • Evalue 6.00e-288
DNA-directed RNA polymerase subunit beta' n=2 Tax=Geobacter metallireducens RepID=RPOC_GEOMG similarity UNIREF
DB: UNIREF100
  • Identity: 63.8
  • Coverage: 538.0
  • Bit_score: 678
  • Evalue 7.40e-192
rpoC; DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 63.8
  • Coverage: 538.0
  • Bit_score: 678
  • Evalue 2.10e-192

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1650
CGCGACCCCCTCTCGGGCGAGATCATCGTCCAGGTCAACACGGAGATCACCGAGGAGCTCGCGCAGAAGATCGAGGACTCGGGTCTGGAGCGCGTGCGCATCCGCTCCACGCTCACGTGCGACACCAAGCGCGGGATCTGCGTCATGTGCTACGGGCGCAACCTCGGGACCGGGCGGCTCGCAGAGCTCGGCGAAGCCGTGGGCATCATCGCCGCCCAGTCCATCGGTGAGCCGGGCACGCAGCTCACGATGCGGACCTTCCACATCGGCGGGACGGCGAGCCGCGTCGTCGAGGCATCCAAGCATGAGTCGAAGAGCGCGGGCGTGGTCAAGTACCACAACCTGCGTACGGTCGTGAACCGCGACGGCGACCTGGTCGCGACCAACCGCAACGGCGAGATCGGCGTGGCCGACGACCGGGGCCGAGAACGGGAGCGCTACCCGGTGGTCTACGGCGCCAAGATCAAGGTGAAGGCGGACCAGCGGATCAAGGCGCGCACGGTCCTCGTCGAGTGGGATCCGTTCACGAACCCGATCCTCACCGAGTTCACCGGCCGGGTCGAGTACCAGGAGATCGTCGAGGGCGTGACCGTGCGGGAGGAGTTCGACGAGGTGACGGGCCTCGCGCGCAAGGTCGTCATCGAGGATCCCGAGGGCAAGCTCCAGCCGGGCATCATCATCCGGTCGGCGGACCCGGAGAACGCCTCCGGCGAGCGGCACCGGTACCCGCTGCCGGTGGGGGCGAACCTCGCGGTGGCCGACGGCACCGAGGTGTTCGCCGCCGACATCATCGCCAAGATCCCTCGGGAGACGACGAAGACCAAGGACATCACCGGCGGCCTGCCGCGCGTGGCGGAGCTGTTCGAGGCGCGCAAGCCGAAGGAGCAGGCGGTCATCACCGAGATCGACGGCCGCGTCGAGATGGGTGGCTTCGTGAAAGGCATGCGTAAGATCGTCATCCGCGCCGACAATGGCGAGACGCGCGAGTACCTGATCCCGCGCGGCAAGCACATCAGCGTCCACGAGGGCGACCGCGTGAGGGCGGGCGAGCCGCTCATGGACGGGTCGCCCAACCCGCACGACTACCTGGCGGTGCTCGGCGACCGCGAGCTGCAGCGCTACCTCGTGAACGAAGTGCAGGAGGTCTACCGCCTCCAGGGCGTCACGATCAACGACAAGCACATCGAGATCATCGTCCGCCAGATGCTCCGACGCGTCCGGATCGAGGAGGTCGGCGACACGGAGTTCGTCGTGGGCGAGCTCGTGGACAAGTTCGGGTTCCAGGAGGAGAACGAGCGGGTCATCGCGCAGGGCAAGCGCCCCGCCACGGCGAAGCCCGTGCTGCTCGGCATCACGAAGGCCTCGTTGTCGACCGACAGCTTCATCTCGGCCGCGTCGTTCCAGGAGACCACGCGCGTGCTCACCGAGGCGGCCATCTCGGGCAAGACGGACGAGCTGCGCGGTCTCAAGGAGAACGTCATCGTCGGGCGGCTGATCCCGGCGGGCACAGGGCTCTCGAACTACACCCGAGTCGAGGTGCTGACGCCGGGCGGCGAGGCCGTGAAGACGCTGGACAGCGTGCTCTCGCTCACGCCCCCGCCCGTCGTCGAGGCCGGCGAATCGGAGGGCAACGTGGCCGCCGCCGGCTAG
PROTEIN sequence
Length: 550
RDPLSGEIIVQVNTEITEELAQKIEDSGLERVRIRSTLTCDTKRGICVMCYGRNLGTGRLAELGEAVGIIAAQSIGEPGTQLTMRTFHIGGTASRVVEASKHESKSAGVVKYHNLRTVVNRDGDLVATNRNGEIGVADDRGRERERYPVVYGAKIKVKADQRIKARTVLVEWDPFTNPILTEFTGRVEYQEIVEGVTVREEFDEVTGLARKVVIEDPEGKLQPGIIIRSADPENASGERHRYPLPVGANLAVADGTEVFAADIIAKIPRETTKTKDITGGLPRVAELFEARKPKEQAVITEIDGRVEMGGFVKGMRKIVIRADNGETREYLIPRGKHISVHEGDRVRAGEPLMDGSPNPHDYLAVLGDRELQRYLVNEVQEVYRLQGVTINDKHIEIIVRQMLRRVRIEEVGDTEFVVGELVDKFGFQEENERVIAQGKRPATAKPVLLGITKASLSTDSFISAASFQETTRVLTEAAISGKTDELRGLKENVIVGRLIPAGTGLSNYTRVEVLTPGGEAVKTLDSVLSLTPPPVVEAGESEGNVAAAG*