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13_1_20cm_2_scaffold_34277_8

Organism: 13_1_20CM_2_Rokubacteria_69_58

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(6536..6973)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Nitrospina gracilis 3/211 RepID=M1Z2C7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 42.7
  • Coverage: 124.0
  • Bit_score: 105
  • Evalue 5.30e-20
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated UNIPROT
DB: UniProtKB
  • Identity: 78.9
  • Coverage: 128.0
  • Bit_score: 201
  • Evalue 5.90e-49
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 43.4
  • Coverage: 129.0
  • Bit_score: 102
  • Evalue 1.30e-19

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 438
GGGAGCTGGATCTACCGGATCACGACGAACACGGCTCTCAACAAGCGGCGCGGCAAGCGGCATGAGCTCGAGACCTCGCTGGAGGAGCTCCTGCCAGCGTTCAACGAAGACGGTCACCGCGAGGGCGACCGCTCGTTCCTGCTGGCGGACTGGTCGCAGAATCCGGAGCGTGAGCTTCTCGCGGGCGAGGCGCGCCAGACGCTGGAACGGGCGCTCGACGCGCTGCCCGAGCGCTACCGGGCGGTGCTGACCCTCAGGGACGTCGAAGAGCTCTCGAACGAGGAGGTCGCCGAGTTGATCGGTGAGTCGGTCGGATCCGTGAAATCCCGGCTCCATCGGGCGCGCATGGCCCTCCGCGAGGAGCTGACCCGATCGCTCGTGTCCGGTTGGCAAGGGTCGCCGGCAGGCGCACCGGCCGCGCGCCCGGCCGTGTCTTAG
PROTEIN sequence
Length: 146
GSWIYRITTNTALNKRRGKRHELETSLEELLPAFNEDGHREGDRSFLLADWSQNPERELLAGEARQTLERALDALPERYRAVLTLRDVEELSNEEVAELIGESVGSVKSRLHRARMALREELTRSLVSGWQGSPAGAPAARPAVS*