ggKbase home page

13_1_20cm_2_scaffold_5251_7

Organism: 13_1_20CM_2_Rokubacteria_69_58

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(5024..7045)

Top 3 Functional Annotations

Value Algorithm Source
General secretion pathway protein E, contains GAF domain n=1 Tax=Candidatus Nitrospira defluvii RepID=B3U4T7_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 56.8
  • Coverage: 659.0
  • Bit_score: 751
  • Evalue 6.50e-214
gspE2; general secretion pathway protein E Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated UNIPROT
DB: UniProtKB
  • Identity: 78.5
  • Coverage: 673.0
  • Bit_score: 1068
  • Evalue 0.0
gspE2; general secretion pathway protein E similarity KEGG
DB: KEGG
  • Identity: 56.8
  • Coverage: 659.0
  • Bit_score: 751
  • Evalue 1.90e-214

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 2022
GTGGCCCAACAAGAATCGGTCCTGGTCCTCCAAGAGCGACTGGCCTACGAGCAGCGGCTCGTCCAGCTCGTCGACCGCATTCACGCGGCCAAGAGCCTCGACTCGATCTTCCTCGAGCTCCAGGGCGACGTCGTGGCTCTGCTCGGCGCCGACCGGATGACGCTCTACGCGGTCGACGCGGAGAAGAAGGAGATCTACTCGAGGTTCCTCGCCCTCAACACGGTCAAGGACATCCGACTCCCGATCAACGAGCGGTCGATCGCGGGCTACGTGGCGACGACCGGCAAGGTCGTCAGCATCGCCGACGCCTACGACAAGGGTGAGCTCGCGAAGATCTCGCCCACCCTCAGCTTCGACGGCTCCTGGGACAAGAAGACCGGCTTCCGGACCCAGCAGATCCTCGCGATGCCGATCACGCACGAGGGGCGGACCACCGGCGTCATCCAGCTCCTCAACAAGCGGAAGGGCACCCGATTCACGAAGGAGGACGAGACCGGGGTGGCCCGGATCGCGAAGACCCTCGGCATCGCCTTCAACAACCAGCTCCTCCAGAGCCAGAGCCGACCGAAGACGAAGTTCGACTATCTCCTCGGACAGCACCGCGTCACCCAGGCCGAGCTCACCTCCGCCCTCGCCGAGTCGCGCCGCCGCCAGGTGGACGTCGAGTCGATCCTGCTCGACCAGTACAAGGTCCCGAAGGCCGAGCTCGGCATCTCACTCTCCCAGTACTACCAGTGTCCGTTCGTCGAGTACGACGAGCGGATCATCCCCCCGCCGGACCTCATGCGGGATCTGAAGCTCGAGTACCTGAAGCGGAACTTCTGGCTCCCGCTGAGACGCGAGGACGGCGCGGTGGTCATCCTCATCGACAATCCTCAAGACCTGCAGCGCGTGGACAGCGTGAGCCAGGCCCTGAAGAACCGAAAGGTCAAGTGGGCGGTGGGCCTCCGGAAGGACATCCTCTCCTACCTCAACGCCTCGCACGGTGAGTCGAGCGCGACGGGCGTGATCGGCAGCATCCTCGGCGAGCTCAAGGCCGAGGAGGCGTCGGGCGAGGGGGAGACGGCCCTGGGCGAGGTCGCCGCGGGCGAGGTCGACGAGAACGACAGCGCCGTCATCCGGCTCGCCAACCAGCTCATCATGGAGGCCTACAAGGCGCGCGCCTCGGACATCCACATCGAGCCCTACGGCACGCAGAAGGATACGGTGGTCCGGTACCGCGTCGACGGCAGCTGCTCCGAGTACCAGAAGATCCCCGGCGCCTTCCGCCGCGCGATCGTCGCGCGCATCAAGATCATGGCGCAGCTCGACATCGCCGAGCGGCGCAAGCCGCAGGACGGCAAGATCCGGTTCAAGATGCCGGACGGCCGGGAGATCGAGCTCCGCGTCGCCACCATCCCTACGCAGAACGCGAACGAAGACGTGGTCATGCGCATCCTCGCCGCGAGCGAGCCGATCCCCATGGACAAGCTCGGGATGACGGAGCGGAACCTCACCGAGCTCCGGAAGATCGCCGAGAAGCCCTACGGCCTCATCCTGTGCGTGGGGCCGACGGGATCGGGCAAGACGACGACGCTCCACTCGATCCTCGGGCACATCAACAAGCCCGAGCGCAAGATCTGGACCGCGGAGGATCCGGTCGAGATCACGCAGTACGGCCTGCGCCAGGTGCAGGTCAACCCGAAGATCGGCTTCACGTTCGCCCAGGCCATGCGCTCCTTCTTGCGCGCGGACCCGGACGTCATCATGGTCGGTGAGATGCGTGACGAGGAGACGGCCTCGACCGGCATCGAGGCGTCGCTCACCGGCCACCTCGTGTTCAGCACGCTCCACACGAACAGCTCCGTGGAGACGGTCATTCGTCTCCTCGACATGGGGCTCGATCCCTTCAACTTCGCCGACGCCCTCCTGGGCGTCCTCGCCCAGCGGCTCGTGAAGCGGCTCTGCCGGGAGTGCCGGACCGAATACCGTCCGGACCGCGCCGAGTTCGACGAGCTCGCGGAGGCGTACGGGACTGCGTGA
PROTEIN sequence
Length: 674
VAQQESVLVLQERLAYEQRLVQLVDRIHAAKSLDSIFLELQGDVVALLGADRMTLYAVDAEKKEIYSRFLALNTVKDIRLPINERSIAGYVATTGKVVSIADAYDKGELAKISPTLSFDGSWDKKTGFRTQQILAMPITHEGRTTGVIQLLNKRKGTRFTKEDETGVARIAKTLGIAFNNQLLQSQSRPKTKFDYLLGQHRVTQAELTSALAESRRRQVDVESILLDQYKVPKAELGISLSQYYQCPFVEYDERIIPPPDLMRDLKLEYLKRNFWLPLRREDGAVVILIDNPQDLQRVDSVSQALKNRKVKWAVGLRKDILSYLNASHGESSATGVIGSILGELKAEEASGEGETALGEVAAGEVDENDSAVIRLANQLIMEAYKARASDIHIEPYGTQKDTVVRYRVDGSCSEYQKIPGAFRRAIVARIKIMAQLDIAERRKPQDGKIRFKMPDGREIELRVATIPTQNANEDVVMRILAASEPIPMDKLGMTERNLTELRKIAEKPYGLILCVGPTGSGKTTTLHSILGHINKPERKIWTAEDPVEITQYGLRQVQVNPKIGFTFAQAMRSFLRADPDVIMVGEMRDEETASTGIEASLTGHLVFSTLHTNSSVETVIRLLDMGLDPFNFADALLGVLAQRLVKRLCRECRTEYRPDRAEFDELAEAYGTA*