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13_1_20cm_2_scaffold_5972_17

Organism: 13_1_20CM_2_Rokubacteria_69_58

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 14391..15047

Top 3 Functional Annotations

Value Algorithm Source
Type II secretion system F domain protein n=1 Tax=Geobacter sp. (strain M18) RepID=E8WPT1_GEOS8 similarity UNIREF
DB: UNIREF100
  • Identity: 62.6
  • Coverage: 214.0
  • Bit_score: 275
  • Evalue 4.40e-71
pilC; type 4 fimbrial assembly protein pilC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated UNIPROT
DB: UniProtKB
  • Identity: 87.2
  • Coverage: 218.0
  • Bit_score: 371
  • Evalue 1.10e-99
type II secretion system F domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 62.6
  • Coverage: 214.0
  • Bit_score: 275
  • Evalue 1.30e-71

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 657
ATGATGATCTTCGTCATCCCGACCTTCGCCAAGATGTTCCAGGGCCTCGGCGCCGACCTCCCGGTGCCCACCCGGATCGTCATGTTCCTTTCCGATTTCACGCAGCGATACATCGTCGTCATGGTGATCGCGGGTGCGGGCGCGATCTACGCGCTCAAGCGCTACTACGCGACCGACCAGGGCAGCAAGGTCATCGACGCGTTCCTCCTGAAGGTGCCGGTCATCGGCATGCTGATCCGCAAGGTCGCCGTCGCGCGGTTCACACGCACGCTCGGCACGCTCATCTCGTCTGGCGTTCCCATCCTCGAGGGGCTTCTCATCACGGCGCGGTCGGCCGGCAACCGCGTCGTCGAGGCCACCGTGATGCAGGCGCGCACGGCCGTCACCTCGGGCCGCACGCTGTCGGAGCCGCTGAAGGGGAGCACCGTGTTTCCCCCGATGGTCGTGCACATGATCAGCGTGGGCGAGAACACGGGCGCCCTCGACCAGATGCTCCAGAAGATCGCCGACTTCTACGACGACGAGGTCGACACCGCCGTGGGCGCGCTCACCGCGCTGCTCGAGCCGATGATGATCGTATTCCTCGGCGTCGTCGTCGGCGGTCTCGTCGTGGCCATGTATCTGCCGATCTTCAAGCTGGTCACGATAATGAAGTAG
PROTEIN sequence
Length: 219
MMIFVIPTFAKMFQGLGADLPVPTRIVMFLSDFTQRYIVVMVIAGAGAIYALKRYYATDQGSKVIDAFLLKVPVIGMLIRKVAVARFTRTLGTLISSGVPILEGLLITARSAGNRVVEATVMQARTAVTSGRTLSEPLKGSTVFPPMVVHMISVGENTGALDQMLQKIADFYDDEVDTAVGALTALLEPMMIVFLGVVVGGLVVAMYLPIFKLVTIMK*