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13_1_20cm_2_scaffold_9881_19

Organism: 13_1_20CM_2_Rokubacteria_69_58

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 16534..17556

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Verrucomicrobium spinosum RepID=UPI00017466F3 similarity UNIREF
DB: UNIREF100
  • Identity: 44.2
  • Coverage: 181.0
  • Bit_score: 154
  • Evalue 1.80e-34
rpoE1; RNA polymerase sigma-E factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated UNIPROT
DB: UniProtKB
  • Identity: 78.4
  • Coverage: 334.0
  • Bit_score: 522
  • Evalue 3.50e-145
rpoE1; RNA polymerase sigma-E factor similarity KEGG
DB: KEGG
  • Identity: 41.3
  • Coverage: 189.0
  • Bit_score: 153
  • Evalue 1.10e-34

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1023
GTGCCGGGTCTCGACGATCTCGCCCTGGTCGAGCGTTGCATCGCCGGCGACGTCACCGCGTTCGAGCCCCTGGTCGAAAAATATCGGGCGCGCGTCTACCGCCTCGCGTTCAACGTCCTGCGCGACACGGAGGACGCGTGGGACGTCGCCCAGGAGGTGTTCATCCGCGCCTGGCAGGCGCTCCCGTCGTTCCGGCGACAGTCGGCCTTCTACACCTGGCTGTTCCGGATCACCATGAACGTGGCGTCCGACCGCGCCCGCCAGCGCTCCGCGCGCGGGCGGGCGTTCGGGACCGAGCGCGTCGAGGAGGAGGAGTGGGAGCGCGAGCTGATCGACCCAGGGGAGCCGCCCGACGCGCGCGCGGCGCGCGGCGAGGCGCGGCGGCGGATCGCGCGCGCGCTCGACGCTTTGCCGGAGCATCACCGCGCGATTATCATGTTGAGTGATCTCGAGGGCCTCTCGTACCGAGAGATCGCAGAGGTGCTGAGGATCCCGATGGGAACCGTCATGTCGCGTCTGCACCACGCGCGCAAGCGCCTGCGCGCGGTGCTCGGCCCGCTGCTCGGTGTGGTCCTCGCCCTCCTGATCCTCCTCGCGCCGACACCTGCCCCGGCGCAGCAGGTCGTGAGCTTCGGTACCCGCGTCGTGCTCGCCGGCGACGCGCCGCCGCCGCCCGGCATGCGGCTCGCGCCGGCGGGGCCCGACGAGCGTCTGGACAGCTTCCTCCCGAAGCTCCGGCAGCACTTCCGCTACAAGGAGTACACCTCCCTGGAGCGCTACCGGGCCGAGGTGCCCATCGGCGCCACCCAGCGCTGGCCCGTGCCCGGCGACCGCCAGCTCGAGGTCACGCCGGAGAGCGTGCGGGGAGGCACCGTGAAGTTCAAGGTGCGCCTCACCCGCGGTAACCTCACCGAGGTGGGGACCAACATCGAGGCGCAGTCGGGCAACCCCGCGGTCATCGGCGGTCCGCGCCACGGCGCCGGCGTCTTGATCATCATCGTCTGGCCGAACCCGAATCCCTGA
PROTEIN sequence
Length: 341
VPGLDDLALVERCIAGDVTAFEPLVEKYRARVYRLAFNVLRDTEDAWDVAQEVFIRAWQALPSFRRQSAFYTWLFRITMNVASDRARQRSARGRAFGTERVEEEEWERELIDPGEPPDARAARGEARRRIARALDALPEHHRAIIMLSDLEGLSYREIAEVLRIPMGTVMSRLHHARKRLRAVLGPLLGVVLALLILLAPTPAPAQQVVSFGTRVVLAGDAPPPPGMRLAPAGPDERLDSFLPKLRQHFRYKEYTSLERYRAEVPIGATQRWPVPGDRQLEVTPESVRGGTVKFKVRLTRGNLTEVGTNIEAQSGNPAVIGGPRHGAGVLIIIVWPNPNP*