ggKbase home page

13_1_20cm_2_scaffold_272_3

Organism: 13_1_20CM_2_Deltaproteobacteria_69_21

partial RP 29 / 55 MC: 1 BSCG 29 / 51 MC: 1 ASCG 6 / 38
Location: comp(2269..4785)

Top 3 Functional Annotations

Value Algorithm Source
ATP dependent DNA ligase n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09E36_STIAD similarity UNIREF
DB: UNIREF100
  • Identity: 51.5
  • Coverage: 842.0
  • Bit_score: 800
  • Evalue 2.00e-228
  • rbh
ATP dependent DNA ligase {ECO:0000313|EMBL:ADO74753.1}; DNA ligase D {ECO:0000313|EMBL:EAU70093.1}; TaxID=378806 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; UNIPROT
DB: UniProtKB
  • Identity: 51.5
  • Coverage: 842.0
  • Bit_score: 800
  • Evalue 2.80e-228
ligD; ATP dependent DNA ligase similarity KEGG
DB: KEGG
  • Identity: 51.5
  • Coverage: 842.0
  • Bit_score: 800
  • Evalue 5.70e-229

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Stigmatella aurantiaca → Stigmatella → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2517
ATGGCGCGTGCACGCAAGTCGTCCGGCAAGCGCACGGCCGCACGGCCGCGAGGGACGGCCTTGACACGGCGCCTGCCGGAGTACGAGGCGAAGCGCGACTTCGCGGTCACCCCGGAACCCGCCCCCGGCAAGGCCGCGCCGCACCCCAAGCCGACGTTCGTCGTGCACAAGCACGACGCGACCCGGCTCCACTACGACGTGCGCCTGGAGATCGACGGCGCGCTCGCCTCGTGGTCGGTGCCCAAAGGACCGAGCTACGATCCGGCGGTCAAGCGGCTCGCCATCCAGACCGAGGATCATCCGCTGGAGTACGGCAGCTTCGAAGGGCGTATTCCGGACGGCGAATACGGCGCTGGCGACTCGCTGATCTGGGACGCCGGCACCTGTGACTCGGTTCCACCGGGTCAGCTCTCGCAGCAGCGCAAGAAGGGCCACATCGTGGTCGAGTTCCACGGCAAGAAGCTGCGCGGGCAGTGGCACCTGGTGCGCACGGACGGCGGGGCGCCCGGCAAGGCACAATGGCTGATGTTCAAGGCCAAGGACGGAGCGGAGGACCCGTCGTACGACGTGATCGCGGAGCGCCCGGAATCGGTGGTCAGCGGGCGCGTGATCACGCGCGGTCCGGAGAGGAGCGGCAAGCTGCGGGCGCCCCGCGCCGCACCCGAGGCGATCCTGCCCGCCTACCTGCCTCCGATGCTGGCGACGCTCGTCGACGCCGTGCCCGCGGGGGAATGGCACGCCGAGGTGAAGTACGACGGCTACCGCGCGCTCTGCGCGCTGTCGAACGGCCGGGTGGCGATGTGGACGCGCAACGCCCTGGATCTCGCGGGAAGGTTCCCCCGCATCGCGCAGGCGCTCGCGCGCATCGTGGTCGGCGATGCGGTGATCGATGGCGAGGTCTGCGTGCTCGATCCCCAAGGCGTGCCGCGTTTCGAGCTGATCCAGCAGGGCCGGACCGAGGAAGCAGTGCTCTTTGCCTTCGACCTGCTACGGCTCGACGGCGAGGACCTGCGGGCGCGCCCCCTGGAGGAGCGCCTCGATCTGCTGCGCAGCGTGCTCTCCAATGCGCCGCCGCAAGTCCAGCTCGCCGAGGAAGTGCGCGGCGACGTGGCGTCCGCGCTGGAGAAGGTGCGCGAGCGCGGGTTGGAAGGCCTGATCCTGAAGGCGCGCGGATCGGTGTACGAGAAGGGGCGCTCGCGCGAGTGGCTGAAGCTCAAAGCACAGGCGACGCAGGAGCTGGCGATCGTCGGGTGGACTCCGGGGAAGGGGAACGCCAGAGGTTCGCTCGGTGCGCTGCTGCTCGCGGTGGCGGACGGGAAGGGCGGCTACGAGTTCGCGGGGAAGGTGGGGACCGGCTTCTCCTCCAAGCAGCGCGCCGAACTGCAGAAGCAGCTGGCGCAGGACGAGCGGCCAGACCCGCCGGCGCGCGGCGCTCCGAGGTTGCGCGATGCCCACTGGGTCGAGCCGCGCCTGGTCGCGCAGGTGCGCTTCACCGAGTGGACTTCGGACGGGAAGCTGCGCCATCCGGCGTTCCAAGGGATCCGCGCGGACAAGAAGCCGGAGGAATGCTTGCGGGAGAAGCCTGCGCCGGTGCCGCCGGCGCCAGCCGCGAAGGGTCGCGCCCGCAAGCCGGAGCCGGTCCCGGCACCCGATCAGCCGCAGAAGCTGACCAATCCGGATCGGCTCCTCTACCCGAAGGACGGGATCACCAAGGCGGACGTCGCTGCGTACTACGACGCCGTCGCGCCGGCGCTCCTGAACGGACTCAAGGACAGGCCGCTGACCCTGGTCCACTGGAACCAGGGCATCGAGAAGCCGAGCTGGTTCCAGCAGGACGTGGGCGCGATGGCGGAAGACTGGATGCGGATCGTGGAGACGCCGGCGCGCACGAAGAAGGGAAGCGTGCGGCACTTGATCGCGGACAGCCCCCGCGCGCTGCGGTGGCTGGCGCAGAACTCCGTCCTGGAGATCCACGCCTGGCACTCGCGCGCGCCGAACCTGACCCAGCCGGACTGGGTGGTGTTCGATCTCGATCCCGCCGAGGGCGAGACCATCGAGCAAGCCCTCGAGGTCGCCGCGGTGCTCCACGGGATGTTCGAGCGGCTCGGGCTCCCCAGCATCCCCAAGACCACGGGCAAGCGCGGGCTGCACATCCTCGTGCCGCTGGCGAAGGGGCACACGTACGAGGACGCGGAGTCGTTCGCGCTGCAGGTCGGCGAGACCGTGGCGAAGCAGCTGAAAAACGTAACGCTGGAGCGCTCGCTGGCGAAGCGCCGCGGGCGCCTCTACTTCGACTGCATGCAGAACGCGTACGGAAAGACGGTGATCGCGCCGTATTCGCTGCGCGGGGTTGACGGCGCCCCTGTCTCCACGCCTTTGCGCTGGAGCGAGGTGGAGCCCGGGCTCGATCCGCGGCAGTTGAATTTGCAGACGATGCCGCAGCGGCTGCGCGAGTTGGGCGATCTGTTCGCTCCAGCGCTGACGCAAGGGGTGCGCCTGCCGCGCTACAAGCGGTGA
PROTEIN sequence
Length: 839
MARARKSSGKRTAARPRGTALTRRLPEYEAKRDFAVTPEPAPGKAAPHPKPTFVVHKHDATRLHYDVRLEIDGALASWSVPKGPSYDPAVKRLAIQTEDHPLEYGSFEGRIPDGEYGAGDSLIWDAGTCDSVPPGQLSQQRKKGHIVVEFHGKKLRGQWHLVRTDGGAPGKAQWLMFKAKDGAEDPSYDVIAERPESVVSGRVITRGPERSGKLRAPRAAPEAILPAYLPPMLATLVDAVPAGEWHAEVKYDGYRALCALSNGRVAMWTRNALDLAGRFPRIAQALARIVVGDAVIDGEVCVLDPQGVPRFELIQQGRTEEAVLFAFDLLRLDGEDLRARPLEERLDLLRSVLSNAPPQVQLAEEVRGDVASALEKVRERGLEGLILKARGSVYEKGRSREWLKLKAQATQELAIVGWTPGKGNARGSLGALLLAVADGKGGYEFAGKVGTGFSSKQRAELQKQLAQDERPDPPARGAPRLRDAHWVEPRLVAQVRFTEWTSDGKLRHPAFQGIRADKKPEECLREKPAPVPPAPAAKGRARKPEPVPAPDQPQKLTNPDRLLYPKDGITKADVAAYYDAVAPALLNGLKDRPLTLVHWNQGIEKPSWFQQDVGAMAEDWMRIVETPARTKKGSVRHLIADSPRALRWLAQNSVLEIHAWHSRAPNLTQPDWVVFDLDPAEGETIEQALEVAAVLHGMFERLGLPSIPKTTGKRGLHILVPLAKGHTYEDAESFALQVGETVAKQLKNVTLERSLAKRRGRLYFDCMQNAYGKTVIAPYSLRGVDGAPVSTPLRWSEVEPGLDPRQLNLQTMPQRLRELGDLFAPALTQGVRLPRYKR*