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13_1_20cm_2_scaffold_4341_8

Organism: 13_1_20CM_2_Deltaproteobacteria_69_21

partial RP 29 / 55 MC: 1 BSCG 29 / 51 MC: 1 ASCG 6 / 38
Location: 8180..11737

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1242864 species="Bacteria; P UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 999.99
  • Bit_score: 1270
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PDT0_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 999.99
  • Bit_score: 1270
  • Evalue 0.0
  • rbh
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 999.99
  • Bit_score: 1261
  • Evalue 0.0

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Taxonomy

Cystobacter fuscus → Cystobacter → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3558
TTGGAACCGACTGCGTCCACGACCTCGCCCTTCGCGCCGCGGCCGAAGGGCAGCCCGACCGCTCTCGCCGAGCTGCTCGCCGCCTTCCGCGGCGGCGTTCGCAAGGTGCAGGCGCGCGGGCTTTTCGGCGCTGCCCGTGGCTACGCGCTGGCCCAACTGGTCCAGGACTCGAAGCGGCCGCTCGTCTGCGTGGAGCCCGACGAGGAGGCGGCCGAGGCGCTGGAGCGCGACCTGCGCTTCTTTGCCGGCGAGCGGTCGGTGGTGCGCATCCCCGCGGACGAAATCCTCCCTTACGAGGGACTGACTCCGGACCGTCTCGTGGCGCAGCAGAGGCTGGCGGCGCTCTTCCGGCTGCATCTCGGGGAACGGCCCATCGTCGTCTGCTCGATCAAGTCGATCGGCCGCCGCGTCCTCCCGCGCGCCGCCCTCGACCGGCGCAGCCTGCAGATCTCGGTGGACATGGAGCAGGACCGCGACGAGCTCGCGCGCATGCTCACCGCGGCCGGATACGCGAAGGTCCCAGTGGTCGAGGATCCCGGCACGTACGCGATCCGCGGCGGCGTCTTCGACGTCTGGTCGCCGCTCGATCCCCAGCCGGCCCGCCTCGAGTTCTTCGGCGACCTGGTGGAGAAGATCCGCTCGTTCGACCCACAGTCGCAGCGCACCTCCGGCGAGCTGAAGGAGCTCTCGCTCTGCCCCGCCCGCGAGATCGTCCTGGACGAGGAGGGCCGGCGCGCCGCGATCGCCACCGTGCGGGCGGCCGCGGACGCGGTGGAAACGCCGTCGCGCCAGCTGCGCGAGCTGATCGACGATCTCACCGCCGCGTCGCAGGACGATGCGCTCTTCGCCGCCGGGCTTACCGCCATCCTGCCAGGGTTCTATCCCGGCGGCCTTTCGCCCCTCACCGAGTATCTGCCCAAGGACGCCATCTGGGTGCTCGACGACCCGCTGGAGCTGGAACGACAGTGGGGCGAACTGTGGCAAGCGCTGGAGGATGCTTTCGCCGACGCCCGCAAGAAGGGGGAACTGGCGCTGGCGCCCGATCAGCATTTCCTGCACGAGCGCGAGATGCGGCCGGCGCTCGAAGCGGCGCCCGTGCTCGAGCTATCGGGCCTGACGATCGGGGCCGAGGCCGCGGTCGGAACGGCGGAGATCGATTTCGACCTGCAGCCGACCAGCGACTTGCGAGCCGAGATCCAGAGCCACCATGGCGAGGACGGGGCGCTCTCGCCGCTGGTGCGGCGGCTGGAGTCGCTGCGCGAGCGCGGGGTCACGGTGATGGTCGCCTGCCACTCCTCGGCGCAGGCGGAGCGGACGAAGCGGCTGCTGCTGGACCGAAATCTGATGGCGCAGATCGTGCCGCTGCGCGAGGCAGCGTTCTCGCCGCACGTGCACGCCGAACTGGTGGTCGGCGAGATCAGCGCGGGATTCGTCGATCTGCACTCCCGGCTGGCGCTCTTCTCCGACGAGGACGTCTTCGGGCCCCGCGCCCAGGCGCGCAGCGCGCCCCGCAGGCCGCGCACGTTCGGGGCCGAAGGGGCTGATTTCCGCGACCTGAAGGAAGGCGACCTGGTGGTGCACGTCGACCACGGCATCGCCCGCTACGACGGGCTGACCCGGCTGAACGTGCGCGGGTTCGCGGCCGATTTCATCCTTCTGCACTTCGCCGGCAAGGACAAGCTGTACCTGCCGGTCGGGCGGCTCCGGCAGATCCAGAAGTACGCGGGCGGCGACCCCGAGAAGGTCCGCCTCGACTCGCTCAAGAGTCAGACCTTCGAGAAGCGAAAAGCCCGGGTCAAGGAAGAGCTGCTGAAGATGGCCGCCGAGTTGCTCGACATCTACGCCGCGCGAGCCGCGCACCAGGGATACGCGTACACGCCGCCGGACGCGATCTACCGGCAGTTCGAGGCCGACTTCGAGTTCGAGGAGACCCCCGATCAAGAGCGCGCCATCGGCGAGGTGCTCGGCGACATGCAGCAGAAGAAGCCGATGGACCGGCTCGTCTGCGGAGACGTGGGGTACGGCAAGACCGAGGTCGCGCTGCGGGCCGCCTTCAAGGCCGTGGAGGACAAAAAGCAGGTGGCCGTGCTGGTGCCGACGACGGTGCTCGCGGCGCAGCACTTCCGCACCTTCGGCAGACGGTTCGCGGATTACCCGGTGACGGTGGAGATGGTCTCCCGGCTGCGCGACGAGAAGCAGATCCGCGAGATCCTGCAGCGCGCGCGAGAGGGAAGGGTGGACGTGATCATCGGCACCCACCGCTTGCTCTCCGCCGACGTCTCGTTCAAGGACCTCGGGCTGGTGGTGGTCGACGAGGAGCAACGCTTCGGCGTGAAACACAAGGAGCAACTGAAGAAGCTGCGCAAGCTGGTGGACGTGCTCACCCTCACCGCGACGCCGATTCCGCGGACGTTGCACATGTCGATGATGGGAGTGCGCGATCTCTCCATCATCGGCACCCCCCCGGTGGACCGGCGCGCCATCCGCACCTTCGTTTCGAAGTTCGACGGCGCGACGATCAAGGAGGCCATCGAGCGGGAGCTGGCCCGAGGTGGCCAGGTCTTCTTCCTGCACAACCGGATCGAGACCATGGACGGCGTGCTCGACTACCTGACGAAGCTCGTTCCTCAGGCGAAGATCGCGGTTGCGCACGGACAGATGCCGGAAGGCAAGCTCGAGAGGGTCATGACCGAGTTCGTCGACCGCAAGCACGACGTGCTGCTCTGCACCGCGATCATCGAGAGCGGGCTGGACATCCCCTCCACCAACACCATCCTGGTCGACAGGGCCGACCACTTCGGGCTGTCGCAGCTCTACCAGATCCGCGGCCGCGTCGGCCGGAGCCGCGAGCGCGCCTACGCGTACCTCCTCATTCCGGCGCGGCGGAGGATCACGCGCGACGCGCAGAAGCGGCTATCTGTATTGCAGCAGTTCACGGAGCTGGGCGCAGGTTTCCAGATCGCCTCCCACGACCTGGAGATCAGGGGTGCCGGCAACCTGCTCGGTCCGGACCAGAGCGGCAACATCGCTTCCGTCGGCTTCGACCTGTACACGCAGCTGATGGAGGAGGCCGTCGCGCAGCTCAAGGGCGAGGAACCGAGGGCGGAGGAGTTCGAGCCGGACGTCGAGCTGCCGATTCCGGCGTTGATCCCGGAGGATTACGTTCCGGACGTGCAGCAGCGGCTCTTCTTCTACAAGCGGCTGGCGTCGGCAGCGACGGAGGAAGCGCTTTACGACGCAAAGGGCGAGCTGCGCGATCAATGCGGCGAGCCGCCTCCGGAGGTCGACGCTCTCGTCGAGGTGATGTCGCTCAAGAACGAGCTGCGCGCGCTGCGCATGCGCGGGCTCAAGAGCGGACCAGGGCGGCTGGTGGTGCAGCTCGGACCGGACGCGGCCCTGGACCCTTCCCGCCTGGCGCAGCTGGTGGCGAAGGGAAAGGGCAGATACCGCCTCACCCCGGGAATGGAGCTGGTAGCCGCGGTGGACGGCGACGCGGCCGCCCTGGAGAGCGCTCGCCAGCTCGTTCGCGAGCTGCGCACCTGCGCACGTGCAAACTAG
PROTEIN sequence
Length: 1186
LEPTASTTSPFAPRPKGSPTALAELLAAFRGGVRKVQARGLFGAARGYALAQLVQDSKRPLVCVEPDEEAAEALERDLRFFAGERSVVRIPADEILPYEGLTPDRLVAQQRLAALFRLHLGERPIVVCSIKSIGRRVLPRAALDRRSLQISVDMEQDRDELARMLTAAGYAKVPVVEDPGTYAIRGGVFDVWSPLDPQPARLEFFGDLVEKIRSFDPQSQRTSGELKELSLCPAREIVLDEEGRRAAIATVRAAADAVETPSRQLRELIDDLTAASQDDALFAAGLTAILPGFYPGGLSPLTEYLPKDAIWVLDDPLELERQWGELWQALEDAFADARKKGELALAPDQHFLHEREMRPALEAAPVLELSGLTIGAEAAVGTAEIDFDLQPTSDLRAEIQSHHGEDGALSPLVRRLESLRERGVTVMVACHSSAQAERTKRLLLDRNLMAQIVPLREAAFSPHVHAELVVGEISAGFVDLHSRLALFSDEDVFGPRAQARSAPRRPRTFGAEGADFRDLKEGDLVVHVDHGIARYDGLTRLNVRGFAADFILLHFAGKDKLYLPVGRLRQIQKYAGGDPEKVRLDSLKSQTFEKRKARVKEELLKMAAELLDIYAARAAHQGYAYTPPDAIYRQFEADFEFEETPDQERAIGEVLGDMQQKKPMDRLVCGDVGYGKTEVALRAAFKAVEDKKQVAVLVPTTVLAAQHFRTFGRRFADYPVTVEMVSRLRDEKQIREILQRAREGRVDVIIGTHRLLSADVSFKDLGLVVVDEEQRFGVKHKEQLKKLRKLVDVLTLTATPIPRTLHMSMMGVRDLSIIGTPPVDRRAIRTFVSKFDGATIKEAIERELARGGQVFFLHNRIETMDGVLDYLTKLVPQAKIAVAHGQMPEGKLERVMTEFVDRKHDVLLCTAIIESGLDIPSTNTILVDRADHFGLSQLYQIRGRVGRSRERAYAYLLIPARRRITRDAQKRLSVLQQFTELGAGFQIASHDLEIRGAGNLLGPDQSGNIASVGFDLYTQLMEEAVAQLKGEEPRAEEFEPDVELPIPALIPEDYVPDVQQRLFFYKRLASAATEEALYDAKGELRDQCGEPPPEVDALVEVMSLKNELRALRMRGLKSGPGRLVVQLGPDAALDPSRLAQLVAKGKGRYRLTPGMELVAAVDGDAAALESARQLVRELRTCARAN*