ggKbase home page

13_1_20cm_2_scaffold_42255_4

Organism: 13_1_20CM_2_Deltaproteobacteria_69_21

partial RP 29 / 55 MC: 1 BSCG 29 / 51 MC: 1 ASCG 6 / 38
Location: 2573..3850

Top 3 Functional Annotations

Value Algorithm Source
Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2TKD2_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 386.0
  • Bit_score: 346
  • Evalue 4.00e-92
Type II/IV secretion system secretin RcpA/CpaC, associated with Flp pilus assembly {ECO:0000313|EMBL:ERK85604.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cy UNIPROT
DB: UniProtKB
  • Identity: 47.7
  • Coverage: 386.0
  • Bit_score: 346
  • Evalue 5.60e-92
outer membrane secretin family protein similarity KEGG
DB: KEGG
  • Identity: 48.2
  • Coverage: 386.0
  • Bit_score: 346
  • Evalue 1.50e-92

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Myxococcus sp. (contaminant ex DSM 436) → Myxococcus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1278
ATGCGACGACTGCCCATCTTCACCCTGCTCTTCGCCGCGGCCGGCGCCGGGCAACCCGAAGGCGCCCTCATCACGCTCGGCGTCGGCCAGCAGAAAGTGATCCAGCTCGACAACGTGGCCCGCGTCGCCATCGGGGAGCCGGAGATCGCCGACGTCAAACAGGTCGGCGGCGGAGGTGAGCTGCTGATCACCGGCGTCGGCGAGGGCCGCACCTCCTTGCTCGTCTGGCGCACCAACGGTTCCCGCCTCGGCTACCTGGTCGTCGTCCGCAGACAGGATCCCAGGGAGTTGATGATCGAAGTTCGCGCGCTGCTCGGCGAGCGCGAGGGGATCCATGTCCGGGTGGTCGGCGACCGGGTGGTCCTCGAGGGAGAGACGCTCACCGGCGACGACTACGAGCGCGTCCAACAGATCACCCAGCTCTATCCGCAAGTGACGTCCTTCGTCCGCCCCAGCGGGAACGCGCGCAGGCTCGCCGCCGAGGCGCTGAACCGGGCGCTGCAACGGCACGGATTTCGCGGCGTATCCGCCGGCGTTCTCGGGAACACGCTGGTGCTCGAAGGCTCCGTGGAGTCGAAGGACGACCTCCGCAAGCTCGATCTGATCGCGCGCGCCGCCGCGGAGAAGGCGGAAAACCTCGTCACGGTGGGCATGAAGAAGATGATCCTGGTGGAGGTGGATTTCGTGGAGGCGAGCTCCGGCAGCACCAGGGCGGTCGGGATCAAACCGCCCGCGGCGCTGGTGTCCGCTGGAGAGGGAGCGACGGCGAGCGTCTCCATCATCCAGCCCATCGCCGGCCTCGACTCCGGGCAGACGCAGAAATCGGCGAGCGTGAGCGTGAGCGCCTCCGCGGCGACGGACTTCTCGGCGGCAGCGCGGTTCGACAACGGAGCCGTCCGGGTGCTGAGCCAGCCACGGCTCGTCTGCGCCAGCGGCGAGAAGGCACAGTTCGTCGCCGGCGGCGAGATCCCGATCGTCATGGTCACGCAGAGCCAGTCGTCGGTGGAATTCAAGAAGTTCGGCATCCTGCTCGACATCACGCCCACCGCCGACAGGAGCGGCAACATCGCGGCCGAGATCCATGCCGAGGTGAGCGACGTCGACCGGAGCATCGCCGTGTCAAAGACGGGGAGACCATCGTCCTCAGCGGGCTGTTCAACTACAGCGAGGACAAGGAGGTCTCGAAGGTGCCGCTGCTGGGGCACATCCCCATCCTCGGCGAGCTGTTCAAGAGCCGCAGCTTCGTCGAGCGCAAGACCGAGCTCGCCATCTACGTGA
PROTEIN sequence
Length: 426
MRRLPIFTLLFAAAGAGQPEGALITLGVGQQKVIQLDNVARVAIGEPEIADVKQVGGGGELLITGVGEGRTSLLVWRTNGSRLGYLVVVRRQDPRELMIEVRALLGEREGIHVRVVGDRVVLEGETLTGDDYERVQQITQLYPQVTSFVRPSGNARRLAAEALNRALQRHGFRGVSAGVLGNTLVLEGSVESKDDLRKLDLIARAAAEKAENLVTVGMKKMILVEVDFVEASSGSTRAVGIKPPAALVSAGEGATASVSIIQPIAGLDSGQTQKSASVSVSASAATDFSAAARFDNGAVRVLSQPRLVCASGEKAQFVAGGEIPIVMVTQSQSSVEFKKFGILLDITPTADRSGNIAAEIHAEVSDVDRSIAVSKTGRPSSSAGCSTTARTRRSRRCRCWGTSPSSASCSRAAASSSARPSSPST*