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13_1_40cm_2_scaffold_305_15

Organism: 13_1_40CM_2_Actinobacteria_65_8

partial RP 18 / 55 MC: 2 BSCG 21 / 51 MC: 1 ASCG 6 / 38
Location: comp(12875..13339)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L13 n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=RL13_CUPPJ similarity UNIREF
DB: UNIREF100
  • Identity: 53.6
  • Coverage: 140.0
  • Bit_score: 168
  • Evalue 5.50e-39
rplM; 50S ribosomal protein L13 similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 140.0
  • Bit_score: 168
  • Evalue 1.50e-39
50S ribosomal protein L13 {ECO:0000255|HAMAP-Rule:MF_01366}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus p similarity UNIPROT
DB: UniProtKB
  • Identity: 53.6
  • Coverage: 140.0
  • Bit_score: 168
  • Evalue 7.60e-39

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Taxonomy

Cupriavidus pinatubonensis → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 465
GTGAGTAAACAGAAGACCTGGACCGCGAAAGCCGCGGACCTGAAGGGTGATTGGTTTGTGGTCGATGCCACGGACCAGGTTTTGGGCCGCCTTGCGAGCAGCGTGGCCAGAATCCTGCGCGGCAAGCACAAGCCGACGTTCACGCCGCACCTGAACACCGGCGACCACGTGGTGGTGATCAACGCCGCCAAGATCAAGGTCAGCGGCGCCAAGCTCACCGGCAAGGAGTACACACGCTACACCGGGTACCCGGGCGGTCTGCGCAAGCGCTCGTTGGGGCGCGCCCAGGAGCTTGACCCGACATTCCCGATCACCAACGCAGTGCGCGGGATGCTGCAGCGGAACACGTTGGGCGCCGACATGCTGAAGCGACTTCGTGTTTACTCGGGAGCCGAGCATGGGCATGCCGCGCAGAAACCGAAGGTGGTCACGTTCGATTCGAGAGGGGACATCAAGATTGGCTGA
PROTEIN sequence
Length: 155
VSKQKTWTAKAADLKGDWFVVDATDQVLGRLASSVARILRGKHKPTFTPHLNTGDHVVVINAAKIKVSGAKLTGKEYTRYTGYPGGLRKRSLGRAQELDPTFPITNAVRGMLQRNTLGADMLKRLRVYSGAEHGHAAQKPKVVTFDSRGDIKIG*