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13_1_40cm_2_scaffold_2410_18

Organism: 13_1_40CM_2_Acidobacteria_56_11

partial RP 24 / 55 MC: 1 BSCG 26 / 51 ASCG 10 / 38
Location: comp(13612..14868)

Top 3 Functional Annotations

Value Algorithm Source
Isopropylmalate/homocitrate/citramalate synthase {ECO:0000313|EMBL:CDM66977.1}; EC=2.3.3.13 {ECO:0000313|EMBL:CDM66977.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; similarity UNIPROT
DB: UniProtKB
  • Identity: 62.7
  • Coverage: 402.0
  • Bit_score: 523
  • Evalue 2.50e-145
2-isopropylmalate synthase (EC:2.3.3.13) similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 409.0
  • Bit_score: 413
  • Evalue 9.70e-113
2-isopropylmalate synthase n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FMN1_SORC5 id=5224560 bin=16ft_combo_ws3_JS1 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 58.1
  • Coverage: 413.0
  • Bit_score: 482
  • Evalue 6.00e-133

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1257
GTGGCAGATCGACAGAAGCTAGTCTACGATTGGAACCTCATCGGGGAGTCCGAGCCGCTAACGGATAAGCGGGTCTTATTGGACGATGAAACGCTCCGCGACGGCCTGCAATCTCCTACGGTTTCGGATCCCGCCATCGAAGACAAGATCCGGCTTCTCCACCTTATGGAAGAGCTGGGTATCCAAATGCTCGATATCGGATTACCCGGCGCCGGCCCGCGCGCCTATGCCGATACGTTGGCTCTCGCGCAAGAGATTGCGCGCAGCCGTTTGAAAATCCGTCCGAATTGCGCGGCGCGAACGACAATTCAAGATATCGACCCGATATGGGATATCGCCGACAAGACGGGAGTCACAATTGATGCCGCGACATTCCTCGGTTCCAGCATGATCCGTCAGTACGTGGAAAACTGGACGATGGACGACCTCCTGCGAAGAACGGAGGAAGCCGTGACGTACGGCATCAAGCGCGGGCTTCCGGTCATGTACGTCACGGAGGATACAACGCGGGCTTTCCCGGAGACGATCAAACGGCTGTACGTGACCGCCATCAATTGCGGCGCGCGCCATATCGTGCTGACCGATACGGTCGGCCATGCAACTCCTGCTGGAGTGCGTGCACTGGTGAGATTCGTCGTCGATGAAGTGGTGAGGCCCTCCGGCGAGGAGATCCTGATCAGTTGGCATGGGCATAACGATCGCGGGCTCAGTGTCATCAACTCGCTTGCAGCCGTTCAGGCAGGAGCGGATGTTATTCACGGCTGCGCGTTGGGTATTGGCGAGCGTGTCGGCAACACGCCGATGGACCAGGTGCTCGTGAACTTAAAACTTCTTGGCGCTATCGATCAGGACCTGATCAAATTGAAAGATTATTGCGAAGTGGCTTCGCGGGCATGCCGAGTGGTCATTCCGCCGGGATACCCGGTTTTCGGCTCCGATGCGTTCCGCACGGCTACGGGCGTGCACGCAGCAGCGGTGATCAAAGCATTCAGGAAAGGCGAGACCGAACTGGCGAACACGGTCTATTCGGGCGTACCATCTCACCTGTTTGGTCTTGAGCAAATCATCGACATCGGTCCGATGAGCGGAAGATCCAACGTGATTTTCTGGCTCGAAAAACGCGGAATTCAACCGAGGGAGGACCGCGTCACCGTCATCTATGAGAAAGCCAAAAAATCGGATCGCTTATTGACGACAAAGGAAGTGCTCGAGGCAATCGACGTGTCGAGTCTCCACGAAGAGCGAAATGTGTTCTGA
PROTEIN sequence
Length: 419
VADRQKLVYDWNLIGESEPLTDKRVLLDDETLRDGLQSPTVSDPAIEDKIRLLHLMEELGIQMLDIGLPGAGPRAYADTLALAQEIARSRLKIRPNCAARTTIQDIDPIWDIADKTGVTIDAATFLGSSMIRQYVENWTMDDLLRRTEEAVTYGIKRGLPVMYVTEDTTRAFPETIKRLYVTAINCGARHIVLTDTVGHATPAGVRALVRFVVDEVVRPSGEEILISWHGHNDRGLSVINSLAAVQAGADVIHGCALGIGERVGNTPMDQVLVNLKLLGAIDQDLIKLKDYCEVASRACRVVIPPGYPVFGSDAFRTATGVHAAAVIKAFRKGETELANTVYSGVPSHLFGLEQIIDIGPMSGRSNVIFWLEKRGIQPREDRVTVIYEKAKKSDRLLTTKEVLEAIDVSSLHEERNVF*