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13_1_40cm_2_scaffold_4583_8

Organism: 13_1_40CM_2_Acidobacteria_56_11

partial RP 24 / 55 MC: 1 BSCG 26 / 51 ASCG 10 / 38
Location: 10255..10833

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5A6M1_9ACTN similarity UNIREF
DB: UNIREF100
  • Identity: 36.2
  • Coverage: 177.0
  • Bit_score: 108
  • Evalue 8.30e-21
sigR; RNA polymerase ECF subfamily sigma factor Tax=RBG_16_Actinobacteria_67_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 38.1
  • Coverage: 176.0
  • Bit_score: 113
  • Evalue 4.70e-22
sigR; RNA polymerase ECF subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 36.2
  • Coverage: 177.0
  • Bit_score: 108
  • Evalue 2.30e-21

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Taxonomy

RBG_16_Actinobacteria_67_15_curated → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 579
GTGGCTGTCCTTATTACAGACATCGACGGAATGAAGACGGTCGCTGTTCGAGCAGAAGACATTGATTTTGACGCTGCTGCTCGGGAACATCGTTCGTTTCTGCTTCAGATTGCGGTTGCTTCCACACGCAATCCGGCCGATGCAGAAGACATTGTCCAGGAAGCCCTTATGCGTGGTTATCGCGGTATCAAACGATTTCGAGGCGACTGCCCACTGCGGATCTGGTTGTCCCGTATCGTCGTTCGCGTGGCGATCAATCATCACCGCAGCCTCGCGCGCCGCCTGAAGCGGTGGGTTTTTTTTGGGGATCTGCAATCGGTTTACGAAGACGGCTCCGTCCAGGAATTCGAACCCGCGGATCCGATGGGCTTCTTCGACCGTGAGGCCGTGTTGGATATACGTAAGCACGTGAACCGTCTTCCAGATGAGTTTCGGATGCCGTTGGTCATGCTGGCTGTGGATGGATTAACAATTCCGGAAATCGCAGGCATCCTCGAAATCCCTGAAGGGACAGTGAAGTCCAGAATTTTTTACGCGCGCAAGCGGCTGAAGCAGGCATTACAAGGCAGGAAAAGGTAA
PROTEIN sequence
Length: 193
VAVLITDIDGMKTVAVRAEDIDFDAAAREHRSFLLQIAVASTRNPADAEDIVQEALMRGYRGIKRFRGDCPLRIWLSRIVVRVAINHHRSLARRLKRWVFFGDLQSVYEDGSVQEFEPADPMGFFDREAVLDIRKHVNRLPDEFRMPLVMLAVDGLTIPEIAGILEIPEGTVKSRIFYARKRLKQALQGRKR*