ggKbase home page

13_1_40cm_2_scaffold_376_7

Organism: 13_1_40CM_2_Archaea_52_13

partial RP 19 / 55 MC: 4 BSCG 6 / 51 ASCG 17 / 38 MC: 1
Location: comp(5903..6142)

Top 3 Functional Annotations

Value Algorithm Source
Putative snRNP Sm-like protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IID4_NITGG similarity UNIREF
DB: UNIREF100
  • Identity: 45.8
  • Coverage: 72.0
  • Bit_score: 76
  • Evalue 1.90e-11
small nuclear ribonucleoprotein; K04796 small nuclear ribonucleoprotein Tax=RBG_13_Bathyarchaeota_38_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 67.5
  • Coverage: 77.0
  • Bit_score: 119
  • Evalue 2.10e-24
putative snRNP Sm-like protein similarity KEGG
DB: KEGG
  • Identity: 46.5
  • Coverage: 71.0
  • Bit_score: 77
  • Evalue 1.40e-12

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_13_Bathyarchaeota_38_9_curated → Bathyarchaeota → Archaea

Sequences

DNA sequence
Length: 240
TTGGAACCATCGAGAAAGCCACTGAACCTTCTCATCCGCAAGATGAACGGCGACGTTGCAGTGAAGCTGAAGAACGATACGGAATACCGGGGCAAGATGATCGACTGCGACAGCCACATGAACATCATCCTCGATGGAGCGAGAGAGTATCGTGGCGGAGACCCGGCCACGAACTATGGAAGCCTGATAGTTAGAGGCAGCAACGTACTCTACATCTGCGTGAGCCAGCCAACAACCTAG
PROTEIN sequence
Length: 80
LEPSRKPLNLLIRKMNGDVAVKLKNDTEYRGKMIDCDSHMNIILDGAREYRGGDPATNYGSLIVRGSNVLYICVSQPTT*