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13_1_40cm_2_scaffold_1185_5

Organism: 13_1_40CM_2_Deltaproteobacteria_68_14

near complete RP 41 / 55 MC: 4 BSCG 42 / 51 MC: 5 ASCG 7 / 38 MC: 2
Location: 3596..7153

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1242864 species="Bacteria; P similarity UNIPROT
DB: UniProtKB
  • Identity: 56.0
  • Coverage: 999.99
  • Bit_score: 1270
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9PDT0_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 56.0
  • Coverage: 999.99
  • Bit_score: 1270
  • Evalue 0.0
  • rbh
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 57.2
  • Coverage: 999.99
  • Bit_score: 1262
  • Evalue 0.0

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Taxonomy

Cystobacter fuscus → Cystobacter → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3558
TTGGAACCGACTGCGTCCACGACCTCGCCCTTCGCGCCGCGGCCGAAGGGCAGCCCGACCGCTCTCGCCGAGCTGCTCGCCGCCTTCCGCGGCGGCGTTCGCAAGGTGCAGGCGCGCGGGCTTTTCGGCGCTGCCCGTGGCTACGCGCTGGCCCAACTGGTCCAGGACTCGAAGCGGCCGCTCGTCTGCGTGGAGCCCGACGAGGAGGCGGCCGAGGCGCTGGAGCGCGACCTGCGCTTCTTTGCCGGGGAGCGGGCGGTGGTGCGCATCCCCGCGGACGAAATCCTCCCTTACGAGGGACTGACTCCGGACCGTCTCGTGGCGCAGCAGAGGCTGGCGGCGCTCTTCCGGCTGCATCTCGGGGAACGGCCCATCGTCGTCTGCTCGATCAAGTCGATCGGCCGCCGCGTCCTCCCGCGCGCCGCCCTCGACCGGCGCAGCCTGCAGATCTCGGTGGACATGGAGCAGGACCGCGACGAGCTCGCGCGCATGCTCACCGCGGCCGGATACGCGAAGGTCCCAGTGGTCGAGGATCCCGGCACGTACGCGATCCGCGGCGGCGTCTTCGACGTCTGGTCGCCGCTCGATCCCCAGCCGGCCCGCCTCGAGTTCTTCGGCGACCTGGTGGAGAAGATCCGCTCGTTCGACCCACAGTCGCAGCGCACCTCCGGCGAGCTGAAGGAGCTCTCGCTCTGCCCCGCCCGCGAGATCGTCCTGGACGAGGAGGGCCGGCGCGCCGCGATCGCCACCGTGCGGGCGGCCGCGGACGCGGTGGAAACGCCGTCGCGCCAGCTGCGCGAGCTGATCGACGATCTCACCGCCGCGTCGCAGGACGATGCGCTCTTCGCCGCCGGGCTTACCGCCATCCTGCCAGGGTTCTATCCCGGCGGCCTTTCGCCCCTCACCGAGTATCTGCCCAAGGACGCCATCTGGGTGCTCGACGACCCGCTGGAGCTGGAACGACAGTGGGGCGAACTGTGGCAAGCGCTGGAGGATGCTTTCGCCGACGCCCGCAAGAAGGGGGAACTGGCGCTGGCGCCCGATCAGCATTTCCTGCACGAGCGCGAGATGCGGCCGGCGCTCGAAGCGGCGCCCGTGCTCGAGCTATCGGGCCTGACGATCGGGGCCGAGGCCGCGGTCGGAACGGCGGAGATCGATTTCGACCTGCAGCCGACCAGCGACTTGCGAGCCGAGATCCAGAGCCACCATGGCGAGGACGGGGCGCTCTCGCCGCTGGTGCGGCGGCTGGAGTCGCTGCGCGAGCGCGGGGTCACGGTGATGGTCGCCTGCCACTCCTCGGCGCAGGCGGAGCGGACGAAGCGGCTGCTGCTGGACCGAAATCTGATGGCGCAGATCGTGCCGCTGCGCGAGGCAGCGTTCTCGCCGCACGTGCACGCCGAACTGGTGGTCGGCGAGATCAGCGCGGGATTCGTCGATCTGCACTCCCGGCTGGCGCTCTTCTCCGACGAGGACGTCTTCGGGCCCCGCGCCCAGGCGCGCAGCGCGCCCCGCAGGCCGCGCACGTTCGGGGCCGAAGGGGCTGATTTCCGCGACCTGAAGGAAGGCGACCTGGTGGTGCACGTCGACCACGGCATCGCCCGCTACGACGGGCTGACCCGGCTGAACGTGCGCGGGTTCGCGGCCGATTTCATCCTTCTGCACTTCGCCGGCAAGGACAAGCTGTACCTGCCGGTCGGGCGGCTCCGGCAGATCCAGAAGTACGCGGGCGGCGACCCCGAGAAGGTCCGCCTCGACTCGCTCAAGAGTCAGACCTTCGAGAAGCGAAAAGCCCGGGTCAAGGAAGAGCTGCTGAAGATGGCCGCCGAGTTGCTCGACATCTACGCCGCGCGAGCCGCGCACCAGGGATACGCGTACACGCCGCCGGACGCGATCTACCGGCAGTTCGAGGCCGACTTCGAGTTCGAGGAGACCCCCGATCAAGAGCGCGCCATCGGCGAGGTGCTCGGCGACATGCAGCAGAAGAAGCCGATGGACCGGCTCGTCTGCGGAGACGTGGGGTACGGCAAGACCGAGGTCGCGCTGCGGGCCGCCTTCAAGGCCGTGGAGGACAAAAAGCAGGTGGCCGTGCTGGTGCCGACGACGGTGCTCGCGGCGCAGCACTTCCGCACCTTCGGCAGACGGTTCGCGGATTACCCGGTGACGGTGGAGATGGTCTCCCGGCTGCGCGACGAGAAGCAGATCCGCGAGATCCTGCAGCGCGCGCGAGAGGGAAGGGTGGACGTGATCATCGGCACCCACCGCTTGCTCTCCGCCGACGTCTCGTTCAAGGACCTCGGGCTGGTGGTGGTCGACGAGGAGCAACGCTTCGGCGTGAAACACAAGGAGCAACTGAAGAAGCTGCGCAAGCTGGTGGACGTGCTCACCCTCACCGCGACGCCGATTCCGCGGACGTTGCACATGTCGATGATGGGAGTGCGCGATCTCTCCATCATCGGCACCCCCCCGGTGGACCGGCGCGCCATCCGCACCTTCGTTTCGAAGTTCGACGGCGCGACGATCAAGGAGGCCATCGAGCGGGAGCTGGCCCGAGGTGGCCAGGTCTTCTTCCTGCACAACCGGATCGAGACCATGGACGGCGTGCTCGACTACCTGACGAAGCTCGTTCCTCAGGCGAAGATCGCGGTTGCGCACGGACAGATGCCGGAAGGCAAGCTCGAGAGGGTCATGACCGAGTTCGTCGACCGCAAGCACGACGTGCTGCTCTGCACCGCGATCATCGAGAGCGGGCTGGACATCCCCTCCACCAACACCATCCTGGTCGACAGGGCCGACCACTTCGGGCTGTCGCAGCTCTACCAGATCCGCGGCCGCGTCGGCCGGAGCCGCGAGCGCGCCTACGCGTACCTCCTCATTCCGGCGCGGCGGAGGATCACGCGCGACGCGCAGAAGCGGCTATCTGTATTGCAGCAGTTCACGGAGCTGGGCGCAGGTTTCCAGATCGCCTCCCACGACCTGGAGATCAGGGGTGCCGGCAACCTGCTCGGTCCGGACCAGAGCGGCAACATCGCTTCCGTCGGCTTCGACCTGTACACGCAGCTGATGGAGGAGGCCGTCGCGCAGCTCAAGGGCGAGGAACCGAGGGCGGAGGAGTTCGAGCCGGACGTCGAGCTGCCGATTCCGGCGTTGATCCCGGAGGATTACGTTCCGGACGTGCAGCAGCGGCTCTTCTTCTACAAGCGGCTGGCGTCGGCAGCGACGGAGGAAGCGCTTTACGACGCAAAGGGCGAGCTGCGCGATCAATGCGGCGAGCCGCCTCCGGAGGTCGACGCTCTCGTCGAGGTGATGTCGCTCAAGAACGAGCTGCGCGCGCTGCGCATGCGCGGGCTCAAGAGCGGACCAGGGCGGCTGGTGGTGCAGCTCGGACCGGACGCGGCCCTGGACCCTTCCCGCCTGGCGCAGCTGGTGGCGAAGGGAAAGGGCAGATACCGCCTCACCCCGGGAATGGAGCTGGTAGCCGCGGTGGACGGCGACGCGGCCGCCCTGGAGAGCGCTCGCCAGCTCGTTCGCGAGCTGCGCACCTGCGCACGTGCAAACTAG
PROTEIN sequence
Length: 1186
LEPTASTTSPFAPRPKGSPTALAELLAAFRGGVRKVQARGLFGAARGYALAQLVQDSKRPLVCVEPDEEAAEALERDLRFFAGERAVVRIPADEILPYEGLTPDRLVAQQRLAALFRLHLGERPIVVCSIKSIGRRVLPRAALDRRSLQISVDMEQDRDELARMLTAAGYAKVPVVEDPGTYAIRGGVFDVWSPLDPQPARLEFFGDLVEKIRSFDPQSQRTSGELKELSLCPAREIVLDEEGRRAAIATVRAAADAVETPSRQLRELIDDLTAASQDDALFAAGLTAILPGFYPGGLSPLTEYLPKDAIWVLDDPLELERQWGELWQALEDAFADARKKGELALAPDQHFLHEREMRPALEAAPVLELSGLTIGAEAAVGTAEIDFDLQPTSDLRAEIQSHHGEDGALSPLVRRLESLRERGVTVMVACHSSAQAERTKRLLLDRNLMAQIVPLREAAFSPHVHAELVVGEISAGFVDLHSRLALFSDEDVFGPRAQARSAPRRPRTFGAEGADFRDLKEGDLVVHVDHGIARYDGLTRLNVRGFAADFILLHFAGKDKLYLPVGRLRQIQKYAGGDPEKVRLDSLKSQTFEKRKARVKEELLKMAAELLDIYAARAAHQGYAYTPPDAIYRQFEADFEFEETPDQERAIGEVLGDMQQKKPMDRLVCGDVGYGKTEVALRAAFKAVEDKKQVAVLVPTTVLAAQHFRTFGRRFADYPVTVEMVSRLRDEKQIREILQRAREGRVDVIIGTHRLLSADVSFKDLGLVVVDEEQRFGVKHKEQLKKLRKLVDVLTLTATPIPRTLHMSMMGVRDLSIIGTPPVDRRAIRTFVSKFDGATIKEAIERELARGGQVFFLHNRIETMDGVLDYLTKLVPQAKIAVAHGQMPEGKLERVMTEFVDRKHDVLLCTAIIESGLDIPSTNTILVDRADHFGLSQLYQIRGRVGRSRERAYAYLLIPARRRITRDAQKRLSVLQQFTELGAGFQIASHDLEIRGAGNLLGPDQSGNIASVGFDLYTQLMEEAVAQLKGEEPRAEEFEPDVELPIPALIPEDYVPDVQQRLFFYKRLASAATEEALYDAKGELRDQCGEPPPEVDALVEVMSLKNELRALRMRGLKSGPGRLVVQLGPDAALDPSRLAQLVAKGKGRYRLTPGMELVAAVDGDAAALESARQLVRELRTCARAN*