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13_1_40cm_2_scaffold_3678_16

Organism: 13_1_40CM_2_Deltaproteobacteria_68_14

near complete RP 41 / 55 MC: 4 BSCG 42 / 51 MC: 5 ASCG 7 / 38 MC: 2
Location: comp(12744..13346)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2U4V1_9DELT similarity UNIREF
DB: UNIREF100
  • Identity: 55.5
  • Coverage: 200.0
  • Bit_score: 186
  • Evalue 1.90e-44
RNA polymerase sigma-70 factor, ECF subfamily {ECO:0000313|EMBL:ERK89953.1}; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxoco similarity UNIPROT
DB: UniProtKB
  • Identity: 55.5
  • Coverage: 200.0
  • Bit_score: 186
  • Evalue 2.70e-44
ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 55.1
  • Coverage: 196.0
  • Bit_score: 185
  • Evalue 2.10e-44

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Taxonomy

Myxococcus sp. (contaminant ex DSM 436) → Myxococcus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 603
GTGCGCATCGCATCACTACAGGGCGAGGTGCCCAGCGCCCGCGACAGGCATTCCGATGAGGAGCTGCTGTCGCGCGCGTGTGCGGGCGATGCGGAGGCATTTCGCGTGATCTTCGATCGGCAGGCTCCGGGGGTGCGGAGGTTCCTGGGCGATCTGCTCCGCGACGACGCGGCTGCGGATGAAGGAACGCAGGAGACGTTCGTGCGCGCGCATCAGCGGCTGCCGACGATCGAGGAGCCGGGCAAGCTGCAGGGATGGCTGTTCGGCATCGCACGGATGGTCTCGTTCGAGCACCTGCGCCGCAAGCGGCGCGACGCATTGCCGGCGGCGCCAGTCGACGAGCCGGTGCAGGTCGACCGGGCGCCCAGCCCGGAGGCGCTGCTGCTCTCGGCGGAATCGGACCGCGTCCTCGATGGCGCCCTCGCCAATCTTGCCGAGGAGCGAAGAGCGGCGCTGCTGATGCGCATCGATCACGGGCTGGGCTACGGCGAGATCGCCTCCGCGATGGGATGGCCGCTGCAGAAGGTGAAGAACGAGATCCACCGGGCCCGGCTCCAGCTCCGCGTGAGCCTCGCCGGGTATCTGGACGAGGGGGCGCGATGA
PROTEIN sequence
Length: 201
VRIASLQGEVPSARDRHSDEELLSRACAGDAEAFRVIFDRQAPGVRRFLGDLLRDDAAADEGTQETFVRAHQRLPTIEEPGKLQGWLFGIARMVSFEHLRRKRRDALPAAPVDEPVQVDRAPSPEALLLSAESDRVLDGALANLAEERRAALLMRIDHGLGYGEIASAMGWPLQKVKNEIHRARLQLRVSLAGYLDEGAR*