ggKbase home page

13_1_40cm_2_scaffold_28952_9

Organism: 13_1_40CM_2_Rokubacteria_68_13

partial RP 17 / 55 BSCG 16 / 51 ASCG 9 / 38
Location: comp(7470..9218)

Top 3 Functional Annotations

Value Algorithm Source
mrdA; penicillin-binding protein 2 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 79.3
  • Coverage: 584.0
  • Bit_score: 934
  • Evalue 6.60e-269
Cell elongation specific D,D-transpeptidase id=4317187 bin=GWA2_Methylomirabilis_73_35 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 76.8
  • Coverage: 585.0
  • Bit_score: 908
  • Evalue 3.60e-261
mrdA; penicillin-binding protein 2 similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 580.0
  • Bit_score: 492
  • Evalue 1.80e-136

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1749
ATGGCGATCGCCGTCGCCGTCATGGGCGCCTTCCTCGTCATCGTCGGCCAGCTCTGGTATCTGCAGGTGCTCGAGGGCGGTCACTTCCTCGACGCCTCTGACAAGAACCGGATCCGCATTCGCCCGGTGGCGGCCCCGCGCGGCATCCTCTTCGACAAGAACGGCGTGCCGCTCGTCGACAATCGCCCCGCGTTCACCCTCTCGCTCATTCCGCGCGAGCTCCCGCGCGAGGACCAGAGTCGGGATGCCGTCCTCGGCCGCGTCGCGTCGCTGCTCCAGATCCCCTACCAGGAGCTGGAAGAGTCGGTCGCCCGCGTGCCATCCGACTCGTTCCTCCCCGTGCGGGTGCGGCGCGGGCTGACGCTCGAAGACATGGCGAAGATCGAGGAGTGGAAGCTCGAGCTGCCCGGTGTGATCGTCGAGGTCGAGCCGCAGCGTACCTATCCCAACAGCCGTTTCGCCGCGCACCTGCTCGGCTACGTGCGCGAGGCCAACGACGAGCAGCTGAAGGGTGGACGCTACCGCCGGGGCGACATGGTCGGACAGAGCGGGCTCGAGCGGCTGCTCGACGAGTTCCTGCGCGGCCGTGACGGTGGCGAGCGGATCGAGGTCGACGCGCTGGGCCGACCCGTGCGCGTGGTGCAGCACACCGATCCGCATCCCGGCTCGCAAGTCATCACGACCATCGACCGGCGCGTCCAGGAAGCCGCCGAACAGGCGATGGAAGGCAAGGCCGGCGCGGTCGTGGTCATGGACCCCCGTAGCGGCGACATCCGCGCGCTCGTCTCGACGCCGGCGTTCGAGATCGATCGGTTCACCGGGACGATCGACCGGGCGGCGTGGCTCCGCGTTGTTCAGGATCCCGAGCATCCCCTGCTGAACCGTGCCATCCAGAGCCAGTACGCCCCGGGGTCCATCTTCAAGATCGTGGTGACCGCGGCCGGGCTGCAGGAAGCCTCGCTGACCCCGATGGATCGCGTGTACTGCAACGGTGAGTTCCATCTGGGAGCGTGGACGTTCAAGGACTGGAAGCAAGGTGGACACGGCAGCGTCGATCTCCAGCGCGCGCTGGCCCAGTCCTGCAACATCTTCTACTACCAGGCCGGGCTCAAGATCGGAGGCGCCGCCATCACGAAATACGCGCGCGCCTTCGGCTTCGGGACAGCAACGGGGGTCGAGCTCGGGGGCGAGAAACTCGGCTTGATCCCTCAGCCCAAGGGGCGCCGGAAAGCGTGGCAGGGCGGTGACATCGTCAACATGTCGATCGGGCAGGGCCAGGTGCTCGTGACGCCGTTGCAGGTCGCCCGCTTCATGGCCGCCGTCGCCAACGGCGGCGTGCTCTGGAAGCCGCGACTCGTCGAGCGCATCGAGCGTGCGGATCGTGGCGTGCTCTACAGCGATCCCGGACAGGTGGCCGGCCATGTCGAGCTCTCGCCCGCGGTGTGGGCGTTCCTGCGCCAGGCGCTCTGGGCCGTGGTGAGCGACGGCACCGGCGTCGGTGCGAAGATCCCGGGGATCGACATCGCCGGTAAGACGGGCACCGCTCAGATGGTCGCGCACTCCAAGGCCGAGAAGGGACAGGACCACGCCTGGTTCGCGGCCTTCGCGCCCGTGCGCGACCCCGAGGTCGTCGTCGTCGTCCTCGTCGAGCGCGGCGGTAAGGGCGGCCAGGTGGCGGCGCCCATCGCCCGGCGGATCCTCAACGCGATCTTCTTCGAGAAGGTGGCGGCCGTGGAGATTCGAGGATGA
PROTEIN sequence
Length: 583
MAIAVAVMGAFLVIVGQLWYLQVLEGGHFLDASDKNRIRIRPVAAPRGILFDKNGVPLVDNRPAFTLSLIPRELPREDQSRDAVLGRVASLLQIPYQELEESVARVPSDSFLPVRVRRGLTLEDMAKIEEWKLELPGVIVEVEPQRTYPNSRFAAHLLGYVREANDEQLKGGRYRRGDMVGQSGLERLLDEFLRGRDGGERIEVDALGRPVRVVQHTDPHPGSQVITTIDRRVQEAAEQAMEGKAGAVVVMDPRSGDIRALVSTPAFEIDRFTGTIDRAAWLRVVQDPEHPLLNRAIQSQYAPGSIFKIVVTAAGLQEASLTPMDRVYCNGEFHLGAWTFKDWKQGGHGSVDLQRALAQSCNIFYYQAGLKIGGAAITKYARAFGFGTATGVELGGEKLGLIPQPKGRRKAWQGGDIVNMSIGQGQVLVTPLQVARFMAAVANGGVLWKPRLVERIERADRGVLYSDPGQVAGHVELSPAVWAFLRQALWAVVSDGTGVGAKIPGIDIAGKTGTAQMVAHSKAEKGQDHAWFAAFAPVRDPEVVVVVLVERGGKGGQVAAPIARRILNAIFFEKVAAVEIRG*