ggKbase home page

13_1_40cm_2_scaffold_5241_8

Organism: 13_1_40CM_2_Rokubacteria_68_13

partial RP 17 / 55 BSCG 16 / 51 ASCG 9 / 38
Location: 9598..11442

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD id=3214743 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 615.0
  • Bit_score: 855
  • Evalue 3.80e-245
rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor Tax=GWA2_Rokubacteria_70_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.8
  • Coverage: 614.0
  • Bit_score: 855
  • Evalue 5.40e-245
rpoD; RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 635.0
  • Bit_score: 601
  • Evalue 3.70e-169

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_70_23_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1845
ATGAGTGAAGAGCCGAAGCTCGAAGAGCTCGATCGCCTGATTTCGATGGGCAAGCAGAAGGGCTTCCTCACCTACGACGAGGTGAACGATGCCCTGCCCTCGGACATCGTCTCACTCGATCAGCTCGACGACATCATGATGATGTTCGGGGCGATGGACATCGAGGTGGTGGATTCCGCCAAAGCGGCCCGCCTGCCTTCCGAGGTGGCGCGGCCGGCGGCGGTCGTCGAGGACGACGACGACGGCGGGGGCGATGCGATCGACCTGTCCCCGGGTCCCGTCGGCCGTACCGAGGACCCCGTTCGCCTTTACCTCCGCGAGATGGGGCGGGTCGCCCTCCTCACCCGCGAGGGCGAGATCGCGCTCGCCAAGCGGATCGAGGAAGGCAAGAACCAGGTCACGGCGGCGATTCTCTCCACCAACCTCGCCCTCGAGCGCTTCCGAGAGCTCCGCGAGTCGCTGCGCCACGGCGAGATCTCCGTCAAGGAAGTCGTGGACGTCAACGAGGAGGAGTTCACCGAGGAGAAGGAAGAAGAGCTACGGCGACAGGTCGTCAACGCCTTCGCCCAGGTCGATCGTCTCCTCCGCGACCGCGATGAGCTGGTCGAGCAGGTGCGGAAGCTCCGGGCCAAGGCCGGCCCCAAGCCGAAGGGCAAGCTGATCAAGGACCCGGCCTGGAAGCGGACCGAGGCCAAGGCCCAGGCGCTGCAGCGCAAGGTGCTCGACAAGCTGCGGGCGCTCGCCATCGGCAACCAGATCATCGACCGTGAAGACAGCGATGCCGCGCGCCGCGGCCTCGTGCAGCGGCTGCGCGACCTGGTGGAAGACATCGAGCGCGCCGAGCGCGTGATCGAGCTGTGGACCAACGGCGCCAGCAAGTCGAAGGAAGAGCGCCAGAACCTCCTGTACGTGTCCTTCCGTGAGCCGGTACCCAACGGCACCACCAACGGCGCCGCCAGCGATCTGCATCTGAAGGCCGCCAAGAAGTTCCCGACGCTCAAGCAGCAGCAGATCTGGGTGGCCCAACAGGAGATCAAGGCCGCCGAGACGCGCGCCAACGCCCGGGCCGACGAGCTCAAGCGCGTGATGGCCGTGATCAAGCAAGGCCAGCAGAAGGCGGCCCAGGCCAAGAAGGAGATGGTCGAGGCCAACTTGAGGTTGGTCATCTCGATTGCGAAGAAGTACACGAACCGCGGCTTGCAGTTCCTGGACCTGATCCAGGAAGGCAACATCGGCCTGATGAAGGCCGTGGACAAGTTCGAGTATCGGCGCGGCTACAAGTTCTCGACCTACGCCACGTGGTGGATCCGGCAGGCCATCACGCGGGCGATCGCCGACCAGGCCCGCACGATCCGCATTCCCGTCCACATGATCGAGACGATCAACAAGCTGATCCGCACCTCCCGCCAGCTCGTCCAGGAACTGGGCCGGGAACCCACGCCCGAAGAGATTGCTGAGAAGATGGACGTGCCCGTCGACAAGGTGCGCAAGGTCCTCAAGATCGCCCAGGAGCCGATCTCCCTGGAGACGCCGATCGGGGAGGAAGAGGACAGCCACCTGGGAGATTTCATCGAGGACAAGCAGGTGGTGTCCCCGGTGGAGTCGATCATCGGCCTCTCGCTCCGCGAGCAGACGAACAAGGTCCTGAACACGCTCACCCCGCGCGAGGAGAAGGTGCTGCGCCTGCGCTTCGGCCTCTCCGACGGCTGCGAGCACACCCTGGAGGAGGTCGGACAGGACTTCGCGGTCACCCGCGAGCGCATCCGGCAGATCGAGGCCAAGGCGCTGCGGAAGCTGCGCCATCCCTCGCGCTCCAAGAAACTGCGGAGCTTCCTCGAGTCGTGA
PROTEIN sequence
Length: 615
MSEEPKLEELDRLISMGKQKGFLTYDEVNDALPSDIVSLDQLDDIMMMFGAMDIEVVDSAKAARLPSEVARPAAVVEDDDDGGGDAIDLSPGPVGRTEDPVRLYLREMGRVALLTREGEIALAKRIEEGKNQVTAAILSTNLALERFRELRESLRHGEISVKEVVDVNEEEFTEEKEEELRRQVVNAFAQVDRLLRDRDELVEQVRKLRAKAGPKPKGKLIKDPAWKRTEAKAQALQRKVLDKLRALAIGNQIIDREDSDAARRGLVQRLRDLVEDIERAERVIELWTNGASKSKEERQNLLYVSFREPVPNGTTNGAASDLHLKAAKKFPTLKQQQIWVAQQEIKAAETRANARADELKRVMAVIKQGQQKAAQAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRAIADQARTIRIPVHMIETINKLIRTSRQLVQELGREPTPEEIAEKMDVPVDKVRKVLKIAQEPISLETPIGEEEDSHLGDFIEDKQVVSPVESIIGLSLREQTNKVLNTLTPREEKVLRLRFGLSDGCEHTLEEVGQDFAVTRERIRQIEAKALRKLRHPSRSKKLRSFLES*