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13_1_40cm_2_scaffold_994_15

Organism: 13_1_40CM_2_Rokubacteria_68_13

partial RP 17 / 55 BSCG 16 / 51 ASCG 9 / 38
Location: comp(10449..10826)

Top 3 Functional Annotations

Value Algorithm Source
LuxR family transcriptional regulator n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4LHA3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 114.0
  • Bit_score: 117
  • Evalue 1.20e-23
COG4566: Response regulator {ECO:0000313|EMBL:CDF92904.1}; TaxID=984195 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp similarity UNIPROT
DB: UniProtKB
  • Identity: 50.4
  • Coverage: 117.0
  • Bit_score: 119
  • Evalue 3.30e-24
two component response regulator similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 123.0
  • Bit_score: 117
  • Evalue 3.30e-24

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Taxonomy

Pseudomonas sp. SHC52 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 378
ATGACTGAGCAGAACGGACGGATGGTTTCGATCGTCGACGACGATGCATCGTTGCGCCGGTCTCTGCGGAATCTCTTGACGTCGGTGGGGCTCCGCGTCGAGACCTTCGAATCGGCGGAGGTGTTCCTGGAATCAGGCTCGCTCGACAAGACGAGCTGTCTCGTTCTCGATCTGCAGATGCCGGGCATGGGTGGTCTCGGCCTCATGAGGCATCTGGCCGAGTCGGACACGCGGATCCCGGTGATCATTGTGACAGCCCACGGCGACGACGACATGCGGCAGCGCACGCTCCAGGTGGGTGCAATCGCGTTCCTGGAGAAGCCAGTCCGGGGGCCCGCTCTTCTCGAGGCTATACGTAGCGCGATCGGCGCGGCGTGA
PROTEIN sequence
Length: 126
MTEQNGRMVSIVDDDASLRRSLRNLLTSVGLRVETFESAEVFLESGSLDKTSCLVLDLQMPGMGGLGLMRHLAESDTRIPVIIVTAHGDDDMRQRTLQVGAIAFLEKPVRGPALLEAIRSAIGAA*