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13_1_40cm_2_scaffold_12129_3

Organism: 13_1_40CM_2_Acidobacteria_68_10

partial RP 40 / 55 MC: 1 BSCG 39 / 51 ASCG 9 / 38
Location: 1994..2554

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 44.4
  • Coverage: 171.0
  • Bit_score: 136
  • Evalue 3.90e-29
ECF subfamily RNA polymerase sigma-24 subunit id=14632550 bin=bin9_gal15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin9_gal15 organism_group=GAL15 similarity UNIREF
DB: UNIREF100
  • Identity: 41.5
  • Coverage: 183.0
  • Bit_score: 134
  • Evalue 8.10e-29
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 40.7
  • Coverage: 182.0
  • Bit_score: 126
  • Evalue 1.10e-26

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Taxonomy

R_Acidobacteria_65_29 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 561
ATGGAGGTTGGCCCCGAGAGTCAGGACAGCGACGGCGAGCTCGTGGCCCGCTACCTCCGCGGGGACGGGTCGGCGTTCGACGCGCTGGTGCTGCGGCACCGGCTGGCGGTCTACCGGGTCGCGTACCGGCTCCTCGGGAGCCACGAAGAGGCGGACGATGTCTCACAGGAGGCATTCTTGAGAGCGTACCGCGCCCTACCCGGCTTCCGGGGCGACGCCAGCTTTCGCACCTGGATCACGCGCATCGTGATCAACCTGGCGCTCAGCGCGCGCCGCGCGCGGGTCACGACCGTGCCGATCGAGAAGGCGGCTCCGCCGAAGGAGGAGGCGGCCGGCCCGGAGGCGGCTCTCAGGCGCGAGGTCCGTCTGGCAGTCCGAGACCTGCCCCGCCGCCAGAGGCAGGTCCTGATCCTGAAGGTCTACGAGGGGATGAAGTTTGCCGAGATCGCCCAGGCGGCCGGCATGTCGATCGGTACCGCCAAGGCGACGTTCTTCCAGGCGGTGCGCAATCTCAGGACCCGGCTGGCGCCGGGAACCGGCCCGCGCCGCGGGGAGGCGTGA
PROTEIN sequence
Length: 187
MEVGPESQDSDGELVARYLRGDGSAFDALVLRHRLAVYRVAYRLLGSHEEADDVSQEAFLRAYRALPGFRGDASFRTWITRIVINLALSARRARVTTVPIEKAAPPKEEAAGPEAALRREVRLAVRDLPRRQRQVLILKVYEGMKFAEIAQAAGMSIGTAKATFFQAVRNLRTRLAPGTGPRRGEA*