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13_1_40cm_2_scaffold_1541_5

Organism: 13_1_40CM_2_Acidobacteria_68_10

partial RP 40 / 55 MC: 1 BSCG 39 / 51 ASCG 9 / 38
Location: comp(4924..5856)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S2X4_DESTD similarity UNIREF
DB: UNIREF100
  • Identity: 42.9
  • Coverage: 266.0
  • Bit_score: 214
  • Evalue 1.30e-52
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 42.9
  • Coverage: 266.0
  • Bit_score: 214
  • Evalue 3.80e-53
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=868864 species="Bacteria; Aquificae; Desulfurobacteriales; Desulfurobacteriaceae; Desulfurobacterium.;" source="Desulfurobacterium th similarity UNIPROT
DB: UniProtKB
  • Identity: 42.9
  • Coverage: 266.0
  • Bit_score: 214
  • Evalue 1.90e-52

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Taxonomy

Desulfurobacterium thermolithotrophum → Desulfurobacterium → Desulfurobacteriales → Aquificae → Aquificae → Bacteria

Sequences

DNA sequence
Length: 933
ATGGCAAATCGTTCTTTTGAAAGAAGTTCCTGCGTTTCGAAATACCTTCAGGAGATCAGCGAGTACCCCCTCCTCACGAAGGAAGAAGAACATGAGATCGCCGTGCGCATGGGAGAGGTCGCCGGCAAGGATGGGTCGTACCACGATCTCGTCAAATCCAACCTGAGCTTCGTCGTCAAGATCGCCAGCGAATATAAGAACATGGGTCTTCCCTTCGAGGACCTGTTGAACGAGGGGAACATAGGGCTTATCGAAGCCGCCCACCACTTCGATCCTGCGCGGGGAACGAAGTTCATCACCTACGCCATCTGGTGGATCCGCAAGTCCATTCTGAAGGCCCTGTCGCAGCACGCCGCCATGGTCCGCATCCCCAACTACCAGCTCAAGAAAGTCCGCAACGTGCGCAACACCGAGCGCATGCTGGCAAAAGAGCTGGGCCGGGAGGCGGACCGGGAGGAGATTTCGAAGGAGCTGCGGGTCACTATCGCCAAGATCGACGAGATCCTGCAGATGAAGATGCGGGAGCTGTCCCTGGACGAGAAGGTCGGCAAGGACAAGGACACGCCGATCTCGGATTACCTCGTGGATGGGCGGTCGATCAATCCCGAGGACGAGTTGATCAAGAACGAGAGCCAGGGCGTCATCCGCATGGCGCTCCGCAGCCTGAGCGATCAGGAACAGACGGTAATCATCAACCGCTTCGGGCTGGAAGGCGGTCGCGTGTTCACCCTCAAGGAGATCGGCGAAAAGCTTGGGGTGTCGCGCGAGCGCGTACGCCAGATTGAAAACCAGGCGAAGAAGCGCCTGCGCAAGCTGATCGCCCGGCAGCAGCATCCCGAAAACCAGTTGGCCAGAAGCGCGAGACTGCGGGCCCACGAGGCCGACGCACTTCCCCCGGTCCGAATCCGTTCCAAGCAGTCGCTGTCGCACTGA
PROTEIN sequence
Length: 311
MANRSFERSSCVSKYLQEISEYPLLTKEEEHEIAVRMGEVAGKDGSYHDLVKSNLSFVVKIASEYKNMGLPFEDLLNEGNIGLIEAAHHFDPARGTKFITYAIWWIRKSILKALSQHAAMVRIPNYQLKKVRNVRNTERMLAKELGREADREEISKELRVTIAKIDEILQMKMRELSLDEKVGKDKDTPISDYLVDGRSINPEDELIKNESQGVIRMALRSLSDQEQTVIINRFGLEGGRVFTLKEIGEKLGVSRERVRQIENQAKKRLRKLIARQQHPENQLARSARLRAHEADALPPVRIRSKQSLSH*