ggKbase home page

13_1_40cm_2_scaffold_39_29

Organism: 13_1_40CM_2_Acidobacteria_68_10

partial RP 40 / 55 MC: 1 BSCG 39 / 51 ASCG 9 / 38
Location: 29866..33171

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=861299 species="Bacteria; Ge similarity UNIPROT
DB: UniProtKB
  • Identity: 59.6
  • Coverage: 999.99
  • Bit_score: 1268
  • Evalue 0.0
Transcription-repair-coupling factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L3_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 999.99
  • Bit_score: 1217
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 59.6
  • Coverage: 999.99
  • Bit_score: 1268
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Gemmatimonadetes bacterium KBS708 → Gemmatimonadetes → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 3306
ATGTCGCTCGACTTCCTGCTCGATCAGTTCAAAGATCTGCCGGCGACCCGTGCGCTCGCCGGGAGTCTCCCGGGCCCGGGATCCCGGGTCCCGGTGTCCGGGCTCCCCGGTTCGAGTCCAGCCCTGCTCGTCGCTGTGCTGGCGCGCCGGCTCCCCCAGCGGGTGTTCGTTGTGGTCACGGCGACGCCGACGGACGCCGAGCGCTGGCTCGCGGACGCCCGCGCCCTCGCGGGCGACGTGGCGGCGCTGTATCCGCAGCGGGAAGCGCTCGGCGCCGAGGAACCACACCTCGAGATCGCAGGCGAGCGCATCGAGACGGTCGAGTCGCTGCTGGCGGGAAGGGTCCGGATTCTGATCACGACGGCGCGTGCCACCGCGGAGCGCACGGGCGTGCCAGCGGCGCTCGACGCGATGCGGCTGGTGCTGCAGGCGAGCGCCGGGCCCCGGGCTCTGGGCCCCGGGGGTTTCACCGAGATCGTCCGCCGCCTCGGTGAGATGGGATACGATCGCGTCCCCACGGTGACCGAGGTCGCGCAATTCAGCGTGCGCGGTGGGATCCTCGACGTGTATGGGTTCGGGATGGCGTCGCCGGCGCGGGTCGAGTGGTGGGGTGACGAAGTCGTGTCACTGCGCACGTTCGATCTTGACTCGCAGCGCTCGGGGGAGCCGATCGAGCGGGTCACGATACTGCCGGTGAGCACCGAAGGGGTCACGACCACCGTGGCGGTGCAGCATGCTGCGCCCCTACAGCGGCAGTCCTTGCTCGATCTCCTCCCTATCGATGCGCTGCTCGTGTTGGAACAGGAATCCGCTCTGGCGCAGGAGGTGGATCGCGCGTGGGCGGAGGCGGAGCATCACCTCGAGATCGCGCGGCGGCTGGGCGAAGAGCCGCCGGCGCGAGCGGAGCTGTTCGTCGCTCCCGAGCGCTGGCGCGGCGAGCTGGCGGCGTTCGGCGGTGTCGCTCTCAATGCGCCGGACGCGTCCACGCGGTTCCCGCTCACCCCGCCCGAGCCGGTGGACCGCGACATCAAGCGACTACGCCGGCTCGTGGCGGCCGGCCCGCCGACGGTGATCCTGTGCGACAACGAGGGCCAGCTCGAGCGGCTGGAGGAGCTGCTCGGCGCGGAGGCCGCGACGCTGGCGATCGGAGCGCTCGACGGCGGGTTCGTCCTGCCGACGCTCCGCGTGCTGACCGACCACGAGATCTTTCGGCGCGCACGCCGCCTGCGGCGGCCGCGGCGCTACCGTGAGGCGTCCGCGACGGCGGCGGCCCGTGCGCTGCAGGCGGGAGACTACGTGGTGCATCTCGAACACGGGATCGGGCTGTATCGCGGGATCCAGACGATCGCGGTCGGCTCGGAGGGCGGGACGCTCGAGGTGGCGGTGGTCGAGTACGAAGGCGGCGATCGGCTCAACGTCCCGCTGTACCGGCTGGATCAGCTCGAGCCCTACCGCGCCGCCGGGAACGGCGACACCCCACCGCCCAAGCTGCACCGTCTCGGTGCGACCACGTGGCAGCGCCAGCGAGACAAGACCCGGGCCGCCATCCGGCAGATGGCGGCCGAGCTCCTCGACCTGTACGGGCGCCGCCAGCTCGCGACCGGGTTCCCATTCCCGCCCGACACCGCGTGGCAGCGCGAGTTGGAGTCGGCCTTCCTGTACGACGACACGCCCGACCAACGTCGCGCCGCTGAGGAGGTGAAGCGCGACATGGAGCGCGCCCGGCCGATGGACCGGCTGCTGGTCGGCGACGTCGGGTACGGCAAGACGGAAGTCGCGCTGCGGGCTGCGTTCAAGGCGGTGCAAGCGGGCAAACAGGTCGCGGTGCTCGCCCCCACGACGATCCTCGCCGAGCAACACGGGCGCACCTTCCGAGAGCGGCTCGCCGATTACCCGGTCCGGATCGAGGTGCTCTCGCGGTTCCGCAATCCCAGGGACACGCAGCGAGTCGTCCAGGGCTTGGAGCAGGGCACCGTGGACCTGGTGATCGGCACCCACCGGCTGCTCTCCCGCGACGTCAGGTTTCACGACCTGGGGCTGTTGATCGTGGACGAAGAGCACCGATTCGGGGTCCGGCACAAGGAGCGGCTGAAAGCGCTGAAGCTCGCGGTGGACGTACTGACGCTCACCGCGACGCCGATCCCACGCACGCTGCACCTGTCGCTCGCCGGCCTGCGCGACCTGACGCTGCTCGAGACGCCGCCGAAGGACCGTTCGCCGGTGCTGACGTTCATCGAGCCGTGGGACGACGCGCTGATCGAGGAGGCGCTGGCGCGGGAGCTCGATCGGGCGGGGCAGGTGTATTTCGTGCATAATCGCATCGAGACGATCGATACGATCGCCGAGCGTGTGCGGGCGCTTGGGCCGCCGCGGGCGCGTATCGCGGTGGCGCATGGCCGGCTCAAGGAGGCGGAGCTCGACGACGTGATGGCGCGGTTCGTGCGGGCCGAGGTGGACATCCTCGTGTCCACGATGATCGTCGAGTCGGGGCTCGACGTCCCGAACGCGAACACGATGATCGTGAACCGGGCGGATCAGCTCGGTCTGGCGCAGTTGTACCAGCTGCGGGGACGTGTGGGACGCAGTCACCGTCGCGCCTACTGCTATCTGCTCGCGCCGGATCTCGTGGATGCGGACGCCGAGGAGCGGCTACGCGTCCTGGAGCATCACACGGACCTGGGCTCCGGTTATCGCATCGCGCTGCGCGACCTCGAGCTGCGCGGCGCCGGGAACCTGCTGGGCGGCGAGCAATCGGGCCATGCGCAGGCCGTCGGCTTCGACATGTACCTGCGGTGGCTCCAGGAAACCGTCGACGCTTTGAAAGGTGGAGAGGGAGGAGCGGGCAGCGCGACGTTCGCGCCGCCAGAGGTCATCCTGGACCGACCCGCTCATCTGCCGGATGCCTACGTGCCCGACGCGGCGGCGAAGCTCGATCTGTATCGGCGGCTGGCGCGGGCCGGGCGGCCGTGCGAGATTCAAGCGGTGCGCGAGGAGCTGCGCGACCGGTTCGGCCCCCTCCCCGACGACGCGCAACGCTTGCTTCTCGTGTCCGAGCTCCGCGCGCTCGGCGCCCAGGCGGGACTGGAGCTGGTCCTCGTCAAAGGCGACGAGGCGCGGCTCACGTTTCGGCGGGACGCGCACCCGCGCCTCGCCGGGCTGACGGCGGCGCTCGATGCCGTGCAGTTCGAGGCCGAGGTGCGGCGCCCGGCGCCGCTCTCCCTGCGGCTGCGCCGGCTGGGCGGCGAAGCCATCGGCCCCGGTCTCGTGCGGGCCCTCACGGCGGTTCTGCAGGACTCTCACGCCTAA
PROTEIN sequence
Length: 1102
MSLDFLLDQFKDLPATRALAGSLPGPGSRVPVSGLPGSSPALLVAVLARRLPQRVFVVVTATPTDAERWLADARALAGDVAALYPQREALGAEEPHLEIAGERIETVESLLAGRVRILITTARATAERTGVPAALDAMRLVLQASAGPRALGPGGFTEIVRRLGEMGYDRVPTVTEVAQFSVRGGILDVYGFGMASPARVEWWGDEVVSLRTFDLDSQRSGEPIERVTILPVSTEGVTTTVAVQHAAPLQRQSLLDLLPIDALLVLEQESALAQEVDRAWAEAEHHLEIARRLGEEPPARAELFVAPERWRGELAAFGGVALNAPDASTRFPLTPPEPVDRDIKRLRRLVAAGPPTVILCDNEGQLERLEELLGAEAATLAIGALDGGFVLPTLRVLTDHEIFRRARRLRRPRRYREASATAAARALQAGDYVVHLEHGIGLYRGIQTIAVGSEGGTLEVAVVEYEGGDRLNVPLYRLDQLEPYRAAGNGDTPPPKLHRLGATTWQRQRDKTRAAIRQMAAELLDLYGRRQLATGFPFPPDTAWQRELESAFLYDDTPDQRRAAEEVKRDMERARPMDRLLVGDVGYGKTEVALRAAFKAVQAGKQVAVLAPTTILAEQHGRTFRERLADYPVRIEVLSRFRNPRDTQRVVQGLEQGTVDLVIGTHRLLSRDVRFHDLGLLIVDEEHRFGVRHKERLKALKLAVDVLTLTATPIPRTLHLSLAGLRDLTLLETPPKDRSPVLTFIEPWDDALIEEALARELDRAGQVYFVHNRIETIDTIAERVRALGPPRARIAVAHGRLKEAELDDVMARFVRAEVDILVSTMIVESGLDVPNANTMIVNRADQLGLAQLYQLRGRVGRSHRRAYCYLLAPDLVDADAEERLRVLEHHTDLGSGYRIALRDLELRGAGNLLGGEQSGHAQAVGFDMYLRWLQETVDALKGGEGGAGSATFAPPEVILDRPAHLPDAYVPDAAAKLDLYRRLARAGRPCEIQAVREELRDRFGPLPDDAQRLLLVSELRALGAQAGLELVLVKGDEARLTFRRDAHPRLAGLTAALDAVQFEAEVRRPAPLSLRLRRLGGEAIGPGLVRALTAVLQDSHA*