ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

13_1_40cm_2_scaffold_8561_6

Organism: 13_1_40CM_2_Acidobacteria_68_10

partial RP 40 / 55 MC: 1 BSCG 39 / 51 ASCG 9 / 38
Location: comp(8334..9359)

Top 3 Functional Annotations

Value Algorithm Source
holA; DNA polymerase III subunit delta; K02340 DNA polymerase III subunit delta [EC:2.7.7.7] Tax=RBG_19FT_COMBO_Nitrospirae_55_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 29.6
  • Coverage: 321.0
  • Bit_score: 138
  • Evalue 2.40e-29
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI000374F5C2 similarity UNIREF
DB: UNIREF100
  • Identity: 28.9
  • Coverage: 322.0
  • Bit_score: 142
  • Evalue 7.10e-31
DNA polymerase III subunit delta similarity KEGG
DB: KEGG
  • Identity: 29.7
  • Coverage: 333.0
  • Bit_score: 134
  • Evalue 5.40e-29

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_19FT_COMBO_Nitrospirae_55_12_curated → Nitrospirae → Bacteria

Sequences

DNA sequence
Length: 1026
ATGCCGGTGTCTCTGAGCTTCGCCCGGTTCCAGGAGGACCTCAGGACCGGACGCGTCGCCCCCACGTACCTGTTCGAAGGGGAGGAGGCGTATTTCCACGACCAGGGGATTCACCTTTTGGAAAGGGCCATCCTCCCGGAGGGTGCTCTGGCGATGAACCGCGACGCCGTGCGCGGCGACGACATTTCGCTGATCGCACTCCTCGACCTTGCCCAGACCTACCCGATGGGGAACGGGCGGCGCCTGGTCGTGGTGCGCGACGCCGACGCCTTGCGCGCGGACAATCTGGAGCCTCTCAAGATCTATCTGAAGACACCCAACCCGCGCGCCTGCCTCGCGTTCAGCGACGTCAAATTCGACCGGCGCCGGGCGCTCTACCGAGTGCTGGCGGACCACGCCACGCGCGTCGATTGCGGGCCCCTCGACGAGGCGCGCGCGGCGGTGTTCGTGCGCGAGCGTCTGCGGAGCAGGGGGTTCGGGATCGGTGCCGACCTCGCATCCGCCATCGCTTCGGGGCTGGCGGGCGCCGGGCTGGGACGGGTCGACGCGGAACTGGAGAAACTGATGACCGCTCTCGGCGCGCCACGACCCGTGGAGGCGGCCGACCTGGCGATTCTCGCCGACGTGCCGCGGGTGGACGATGTCTTCCGCCTGGCGGCGCACGCGGCGCGGGGAGAGCGCGGCGAGGCCGTCGGAATTCTGCGAGCCCTCGTGCGCGAGGGCGAAGACCCGATCAAGATCCTCGGCGGGCTCTCCTGGTACTTTCGCAACGCGCTGCGCGCCATGGTGGCCGACACGCGCCGTCTGCCGCCGCGGGAGACGACGGCCCTCTACGGCATCGATCGGGGGCGCATCGACCGATTCGCCCGCGAACTCGGCCGGACCCCTGCCGAGGACCTGAGGGAAGCGCTGGCTTATTGCCTGAAGGCGGATCGCGAGCTCAAGGGCATGGGGGCGAGGGATCCCGCGCACGCCCTGGAGAGGCTGGTGCACCACGTGGGGCGGCGCGCCCGGAGGCCTGCATGA
PROTEIN sequence
Length: 342
MPVSLSFARFQEDLRTGRVAPTYLFEGEEAYFHDQGIHLLERAILPEGALAMNRDAVRGDDISLIALLDLAQTYPMGNGRRLVVVRDADALRADNLEPLKIYLKTPNPRACLAFSDVKFDRRRALYRVLADHATRVDCGPLDEARAAVFVRERLRSRGFGIGADLASAIASGLAGAGLGRVDAELEKLMTALGAPRPVEAADLAILADVPRVDDVFRLAAHAARGERGEAVGILRALVREGEDPIKILGGLSWYFRNALRAMVADTRRLPPRETTALYGIDRGRIDRFARELGRTPAEDLREALAYCLKADRELKGMGARDPAHALERLVHHVGRRARRPA*