ggKbase home page

13_1_20cm_2_scaffold_3720_11

Organism: 13_1_20CM_2_Acidobacteria_65_9

partial RP 12 / 55 MC: 1 BSCG 12 / 51 ASCG 7 / 38
Location: 12129..12614

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase, rsuA family (EC:5.4.99.-); K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] Tax=GWA1_Bdellovibrionales_52_35_curated UNIPROT
DB: UniProtKB
  • Identity: 54.6
  • Coverage: 163.0
  • Bit_score: 170
  • Evalue 1.60e-39
pseudouridine synthase, rsuA family (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 51.5
  • Coverage: 163.0
  • Bit_score: 156
  • Evalue 8.20e-36
Pseudouridine synthase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PGB4_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 50.9
  • Coverage: 163.0
  • Bit_score: 155
  • Evalue 6.40e-35

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA1_Bdellovibrionales_52_35_curated → Bdellovibrionaceae → Bdellovibrionales → Bdellovibrio → Bacteria

Sequences

DNA sequence
Length: 486
GTGGTGACGCCGCGGCGGGACCCGGAAGGGCGACGCACGATCTACGACGTGCTGGGCGACGATGCGCGGGGGTTGATTGCGGTCGGCCGGCTCGATCTCGCGACGACCGGTGGGCTGCTGCTGACGACCGACACGCCGCTGGCGAACTGGATGACCGATCCGGCCAACGAGGTCCCGCGCGTCTACGTCGTCACCGTTCGCGGCGAAGTGACGCCGGCGAAGCTGAACGATCTGCCCGCGACTCGCGCGACGCTGCGCAAAGCGTCGTCGCGCGAGTCCCATCTGATCGTCGAGCTGCGTGAAGGGAAAAACCGTCAGGTGCGGCGGATGTTCGAGGCGATCGGCCACGAAGTGACGCGGCTCAAACGGGTAAAGCTCGGCGGGCTCGAGCTCGACGCGCTCGAGCCCGGCGAGTGGCGTGAGGTGACGCGCGCCGAGCTGCGCGCCGCGTTTCCTGGCGTGCGAGTCAGTGCACTGTCTTCTTGA
PROTEIN sequence
Length: 162
VVTPRRDPEGRRTIYDVLGDDARGLIAVGRLDLATTGGLLLTTDTPLANWMTDPANEVPRVYVVTVRGEVTPAKLNDLPATRATLRKASSRESHLIVELREGKNRQVRRMFEAIGHEVTRLKRVKLGGLELDALEPGEWREVTRAELRAAFPGVRVSALSS*