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13_1_20cm_2_scaffold_174_10

Organism: 13_1_20CM_2_Acidobacteria_60_10

partial RP 32 / 55 BSCG 36 / 51 ASCG 10 / 38 MC: 1
Location: comp(14377..15042)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase subunit sigma-24 n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B5BE36 similarity UNIREF
DB: UNIREF100
  • Identity: 50.5
  • Coverage: 188.0
  • Bit_score: 172
  • Evalue 4.10e-40
RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated UNIPROT
DB: UniProtKB
  • Identity: 48.6
  • Coverage: 212.0
  • Bit_score: 189
  • Evalue 4.60e-45
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 41.5
  • Coverage: 195.0
  • Bit_score: 153
  • Evalue 5.60e-35

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 666
ATGTCTCGGAATGGAACGAGAAGCGCGAAGAATGATATTTCCCAACATACCTTTGGCCAGCTCCAAAAGCTTCCTGACGAAGAACTGATGACTCAACTACAAAACGGATTCGACGATGCACTCGCAGTTCTCTTCGATCGCTACCACCGCCTAGTTTACGCCATCGCTGCCAGAGTCGTTCGAGATGCGGGGGAGGCTGAAGATGTCATGCAAACGGTCTTTCTCGACATTTACAGGGCTAAGGCACGATTTGATGCTTCGAAAGGCAGTACTAAGGTGTGGCTCCTTCAATACGCGTATCACCGGAGCATCAACCGGCGGCAGCAATTGAGCACGAGGAATTTTTATAACCAAAGCGGCATTGAGGAATTCTACGACGCTGACCGGCTGTCCGCGACGTCAGGTCGTGGCGCGCAACCATCTCAGGAGTCTTCGGTCCTGGTGCGCGAGGCATTGGCGACATTGAACGAGGCGCAGAAGACGGCCCTCGAGCTGGCCTACTTTGACGGGCTAACCATGCAGGAGATCGCGGAGAAAACTGGGGAAACGGTGGCGAACGTTCGCCATCATTTCTATCGCGGTTTAGACAAGCTTCGCTCCTGCCTCAAAATTGAGCCCAAGAGAGTCCGCGTCACCCAGGAGGAAATCTCCCGTGTTGAATCATGA
PROTEIN sequence
Length: 222
MSRNGTRSAKNDISQHTFGQLQKLPDEELMTQLQNGFDDALAVLFDRYHRLVYAIAARVVRDAGEAEDVMQTVFLDIYRAKARFDASKGSTKVWLLQYAYHRSINRRQQLSTRNFYNQSGIEEFYDADRLSATSGRGAQPSQESSVLVREALATLNEAQKTALELAYFDGLTMQEIAEKTGETVANVRHHFYRGLDKLRSCLKIEPKRVRVTQEEISRVES*