ggKbase home page

13_1_20cm_2_scaffold_7020_13

Organism: 13_1_20CM_2_Acidobacteria_60_10

partial RP 32 / 55 BSCG 36 / 51 ASCG 10 / 38 MC: 1
Location: comp(10800..11282)

Top 3 Functional Annotations

Value Algorithm Source
RHS repeat-associated core domain protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0THP1_9BACE similarity UNIREF
DB: UNIREF100
  • Identity: 34.0
  • Coverage: 153.0
  • Bit_score: 82
  • Evalue 5.30e-13
Marine sediment metagenome DNA, contig: S01H1_L01723 {ECO:0000313|EMBL:GAF84076.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin UNIPROT
DB: UniProtKB
  • Identity: 42.0
  • Coverage: 169.0
  • Bit_score: 129
  • Evalue 4.10e-27
YD repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 36.1
  • Coverage: 147.0
  • Bit_score: 81
  • Evalue 2.00e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 483
GTGAACCGGCTGACAACAAAGAACTATCCTGATAGCACTACCGTGAATTACACGTATGACCTGGATTCGCGCCTGACGCAGGTCTCCGACCCCACGGGGACCAATACCTATACCTACGACAACAACGGCAACACGCTGACCAAGGTAGTGGGCTCGAACACCACCACCTACGCCTGGGACTTCGAAAACCGTATGACGAGCGTCACTCTGCCCGGCTCTGGCGGCACCGTTAGCTTCAAGTACGATGCGTTTGGCCGCCGCATCCACAAATACTCATCCAGCGGAACATCCGTCCTTGCGTACGACGGAGACAACCTCATCGAAGAAACCAACTCTTCTGGTGCAGTTGTCGCGCGTTATTCGCAGGGACTAAACATCGATGGACCGCTCGCCATGCTGCGCAGTGCAGCGACCGGCAATTACCGCGCCGGCGGACTCGGCTACATGTTATCGCTCAACGGCGCTTTCATCAAAGCACTCTAA
PROTEIN sequence
Length: 161
VNRLTTKNYPDSTTVNYTYDLDSRLTQVSDPTGTNTYTYDNNGNTLTKVVGSNTTTYAWDFENRMTSVTLPGSGGTVSFKYDAFGRRIHKYSSSGTSVLAYDGDNLIEETNSSGAVVARYSQGLNIDGPLAMLRSAATGNYRAGGLGYMLSLNGAFIKAL*