ggKbase home page

13_1_20cm_2_scaffold_1541_2

Organism: 13_1_20CM_2_Acidobacteria_55_15

near complete RP 44 / 55 BSCG 46 / 51 ASCG 14 / 38
Location: comp(770..1840)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Rhodopirellula baltica SH28 RepID=K5DLR2_RHOBT similarity UNIREF
DB: UNIREF100
  • Identity: 29.3
  • Coverage: 317.0
  • Bit_score: 137
  • Evalue 3.10e-29
hypothetical protein Tax=RIFOXYA2_FULL_RIF01_40_8_curated UNIPROT
DB: UniProtKB
  • Identity: 30.8
  • Coverage: 321.0
  • Bit_score: 146
  • Evalue 5.50e-32
RNA polymerase, sigma-24 subunit, ECF subfamily-like hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 35.1
  • Coverage: 114.0
  • Bit_score: 81
  • Evalue 5.70e-13

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFOXYA2_FULL_RIF01_40_8_curated → RIF1 → Bacteria

Sequences

DNA sequence
Length: 1071
ATGAGGTTGCTGATTGCCATCCTCCTCCTGACCGCAGGGCTCAATGCTGCTGGCCGCGAGCGCCTTCAGCGAGAGCGGCCGTCAAGCGTCGCCAATGCACTTGATGCGTTAGGTCTGCTGCAGCCGGAATCGGTGCGATCGATCCTGCTTCTTCACTCCGGCAAGAGTCTTTTGCGGTCCAAGGCCGGCGAATTGGAAGCCGCTCTGCGGAAGGACCCGAATAATATCGACGACCGTTTAATGCTGATCGGTTATTACACCTCGAACGGACGCGGGTCCGCAGATCGGCTCCGTCTTCGCAGTCATGTGCTGTGGATGATCTCTAACCACCCGGAACACGCATCGACGGCGGAACCGAGCCTGCACGACTTGCCCGACGATCCGGAGGGTAATTCACAAGTTCTGGAACTCTGGAAGAACAATCTTGGGTCACACCCCAATGATCTGCCGGTGCTCAAGAATGCAGAAAAATTTTTCTTCGGAAAAGAGCCGGCCGAGGCGGACCGTCTGATCCATCGTATCTCGGAGAGAGAGCCGGACAGCAGTGAATGGCCTGTGGAGTTGGCCCATTTATATCGCATGTTCGGAATTCCCGGTGAGAAAATCGACAACCCCGCGGAGAGAGCCATCGAAGAATACAGGCGCGTGCTGGAACTAACGAAAAATCCTGCCGCGCGCGAGGCGCTGCCGGGTGAAATGGCGGATGCCGCATTCCGTATCGGTGACTTTCCGGCCGCCGTCGAGCTGGCCAAGATTTATCTCAAGAGTTCGGATCGGCCCGCCGTGCAGCGCGCGAACACGATTCTGGGGCGCATCGCACTGCGGACGGGCGACCTGGCCGATGCAAGACAGTATTTGCTCGATTCGGCGAACCCGGCCGCAGCGCCCGACATTGCCTTGTCAGGACCGACGCTCGTGCTTGCCAAAGAACTCATCGAACATGGCGAGCGCGAGACGGTGCTCGCGTATCTCGAGAGCTGTTTGAAGTTGTGGCCGCGCGGGGAGAATGTCCTGCGGATTTGGATTGCGGATATCAAAAACGGGAGAACGCCGAATCTTGGTGGTCCGTAA
PROTEIN sequence
Length: 357
MRLLIAILLLTAGLNAAGRERLQRERPSSVANALDALGLLQPESVRSILLLHSGKSLLRSKAGELEAALRKDPNNIDDRLMLIGYYTSNGRGSADRLRLRSHVLWMISNHPEHASTAEPSLHDLPDDPEGNSQVLELWKNNLGSHPNDLPVLKNAEKFFFGKEPAEADRLIHRISEREPDSSEWPVELAHLYRMFGIPGEKIDNPAERAIEEYRRVLELTKNPAAREALPGEMADAAFRIGDFPAAVELAKIYLKSSDRPAVQRANTILGRIALRTGDLADARQYLLDSANPAAAPDIALSGPTLVLAKELIEHGERETVLAYLESCLKLWPRGENVLRIWIADIKNGRTPNLGGP*