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13_1_20cm_2_scaffold_4343_3

Organism: 13_1_20CM_2_Acidobacteria_55_15

near complete RP 44 / 55 BSCG 46 / 51 ASCG 14 / 38
Location: 3405..3938

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4EX16_MODMB similarity UNIREF
DB: UNIREF100
  • Identity: 41.8
  • Coverage: 170.0
  • Bit_score: 120
  • Evalue 1.50e-24
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AIA10580.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" UNIPROT
DB: UniProtKB
  • Identity: 41.8
  • Coverage: 182.0
  • Bit_score: 134
  • Evalue 1.80e-28
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 41.8
  • Coverage: 170.0
  • Bit_score: 120
  • Evalue 4.20e-25

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 534
ATGCTTTTGCGGACAGCGGGCAGGGACCAGGACTTGGTGGAGGCCTGCATCGATGGCGATGAGGCTTCGTGGGCTGAGCTGATTCGAAAATATCAGCGGCTCATCTATTCGACAGCGCGGGTCCTCTGTCCCGAACCGGCAGACACAGCCGACGTTTTTCAGCAAGTCTGCCTGGAGCTCTATCGACGGTTACTTCACCTGCGCGACGTTCAGAGCCTTCCGAAATGGTTGATCAAAGTCACTCGCGCGAAAAGCGTGGACATGCTTCGCAGGCGGCCCAGGACGACGGAGTTGGCCGAAGATGAAATCCCCTGCGATCCTCAAATCGAGACATCAGAGCGTCATCACGAATTGGAACAGGCTCTCGAACAACTTCCAGAGCGTTCCCGTCGATTACTCAACCATTTGTACTTCAGTGAAGAGCCCTTAAGTTACGCCGAAATCGCACAGCGCCTCGGCATACCGGTTTCTAGTATCGGACCGACGCGTGCCCGCAGCCTGCAGAAGCTTCGGAGGCTGATGCAATCGCAATGA
PROTEIN sequence
Length: 178
MLLRTAGRDQDLVEACIDGDEASWAELIRKYQRLIYSTARVLCPEPADTADVFQQVCLELYRRLLHLRDVQSLPKWLIKVTRAKSVDMLRRRPRTTELAEDEIPCDPQIETSERHHELEQALEQLPERSRRLLNHLYFSEEPLSYAEIAQRLGIPVSSIGPTRARSLQKLRRLMQSQ*