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13_1_20cm_2_scaffold_859_12

Organism: 13_1_20CM_2_Acidobacteria_55_15

near complete RP 44 / 55 BSCG 46 / 51 ASCG 14 / 38
Location: comp(12174..12413)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor rpoD (Sigma-80) n=1 Tax=mine drainage metagenome RepID=E6QN15_9ZZZZ similarity UNIREF
DB: UNIREF100
  • Identity: 82.3
  • Coverage: 79.0
  • Bit_score: 131
  • Evalue 2.90e-28
RNA polymerase sigma factor rpoD (Sigma-80) {ECO:0000313|EMBL:CBI08636.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;" UNIPROT
DB: UniProtKB
  • Identity: 82.3
  • Coverage: 79.0
  • Bit_score: 131
  • Evalue 4.10e-28
RpoD subfamily RNA polymerase sigma-70 factor similarity KEGG
DB: KEGG
  • Identity: 82.1
  • Coverage: 78.0
  • Bit_score: 130
  • Evalue 2.40e-28

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Taxonomy

mine drainage metagenome

Sequences

DNA sequence
Length: 240
AATTTAAAGGAAATGACAGAGCAGGTGCTGAACACACTGACGCCTCGTGAAGAGCGCATCATCAAGATGCGGTTTGGACTGGAGGACGGCACCGAGCACACGCTTGAAGAGGTCGGCCAAAACTTCGGTGTCACGCGAGAGCGCATACGGCAGATCGAAGCAAAGGCTCTTCGCAAACTTCGTCATCCCAGCCGCAACCGCCGCCTGCGCGCATTCGTCGCCGGAACGAACCGAGATTAA
PROTEIN sequence
Length: 80
NLKEMTEQVLNTLTPREERIIKMRFGLEDGTEHTLEEVGQNFGVTRERIRQIEAKALRKLRHPSRNRRLRAFVAGTNRD*