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13_1_40cm_3_scaffold_236_8

Organism: 13_1_40CM_3_Gemmatimonadetes_66_12

partial RP 18 / 55 BSCG 21 / 51 ASCG 10 / 38 MC: 1
Location: comp(8291..8935)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEN0_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 74.9
  • Coverage: 195.0
  • Bit_score: 291
  • Evalue 5.90e-76
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_16_Gemmatimonadetes_66_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.1
  • Coverage: 214.0
  • Bit_score: 361
  • Evalue 8.50e-97
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 75.2
  • Coverage: 202.0
  • Bit_score: 305
  • Evalue 1.50e-80

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Taxonomy

RBG_16_Gemmatimonadetes_66_8_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 645
ATGCGGACCACGCTCAAGCATCCCACGCCGGCTGTCGACTCGCAGCGAGCGCTGCAGCGCGAAGCGCTGCACGAGCTGGACGACGGTCAGGTCGTGATGCGCCATCTGGCGGGTGAGCCGCAGGCGTTTGGCACGCTGGTGGATCGCTACCAGACGCGGTTGCTCAATTTCGTCAATCGGACCATCGGTGACCGTGAGCGGGCTGAGGACCTGGTGCAGGAAGTCTTCATCCGGGTCTTCCGTCACCTGCATCGCTTCGATCAGACCAAGAAATTCTCGACGTGGATCTATACGATCGCGTCCAATCTGGCGAAGAACGAGCTCCGCAACCGCAGCCGCAACCCGCTGGTTCTGTTCCAAACCATCAAGAAGAATTGGGAAGCGGATCACCGGCCGCTGCAATTCGAGGACGCCACCGCGCGGCCCGACGATCTCTATCGGAAGCGGTTCCTGAAGGATGCCGTGGATCAGTGCGTACAGCGGCTGCCCGAGCACCACCGGGAGGTGTTCGTGCTTCGGGAGCTCGAAGGGAAGAGCTACCAGGAGATCGCCGAGATCACGGGGTGCAACCTGGGCACGGTGAAGAGCCGCCTCAATCGGGCACGCAACAGCTTCGCCCAGCTCATCGGCCCCATCCTCGTTTAG
PROTEIN sequence
Length: 215
MRTTLKHPTPAVDSQRALQREALHELDDGQVVMRHLAGEPQAFGTLVDRYQTRLLNFVNRTIGDRERAEDLVQEVFIRVFRHLHRFDQTKKFSTWIYTIASNLAKNELRNRSRNPLVLFQTIKKNWEADHRPLQFEDATARPDDLYRKRFLKDAVDQCVQRLPEHHREVFVLRELEGKSYQEIAEITGCNLGTVKSRLNRARNSFAQLIGPILV*