ggKbase home page

13_1_40cm_3_scaffold_292_2

Organism: 13_1_40CM_3_Gemmatimonadetes_66_12

partial RP 18 / 55 BSCG 21 / 51 ASCG 10 / 38 MC: 1
Location: 1124..1597

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TG28_9CHLR similarity UNIREF
DB: UNIREF100
  • Identity: 56.1
  • Coverage: 164.0
  • Bit_score: 172
  • Evalue 2.90e-40
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:EFH88730.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 56.7
  • Coverage: 164.0
  • Bit_score: 173
  • Evalue 2.40e-40
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 171.0
  • Bit_score: 160
  • Evalue 3.30e-37

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Ktedonobacter racemifer → Ktedonobacter → Ktedonobacterales → Ktedonobacteria → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 474
TTGGAGTTCGCAGCGGTCGTGTTACCGCACCTCGATGCCGCGTACACATTGGCGCGCTACTTGACGCGCAATGACGCGGACGCGCAGGACGTCGTGCAGGACGCGGCGCTGCGCGCACTCAAGTATTTCGGCGGGTTTCGCGGAACGACCGGACCCGATGGTCGCGCGTGGTTTCTCGCGATCGTGCGGAACACGGCGTACACCTGGCGACACCGGCAACAGGGGGACGGGCTTGTCACCCAGTTCAACGAGGAGCTGCATAGCGACGCCGGCACGGCGGCCGATCCTGCGGCAGCGGTGGATCTCCGGCAGGCTATCGACGCGTTGCCGCTCGAATTCCGCGAGGTGATCGTGTTGCGGGAGCTCGAAGGATTGTCCTACAAGGAAATCAGCGACGTCACGGGCGTGCCCGTCGGCACGGTGATGTCGCGGCTCTCCCGAGCCCGCAAACGCTTGCAAGAGGCGTTGACATGA
PROTEIN sequence
Length: 158
LEFAAVVLPHLDAAYTLARYLTRNDADAQDVVQDAALRALKYFGGFRGTTGPDGRAWFLAIVRNTAYTWRHRQQGDGLVTQFNEELHSDAGTAADPAAAVDLRQAIDALPLEFREVIVLRELEGLSYKEISDVTGVPVGTVMSRLSRARKRLQEALT*