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13_1_40cm_3_scaffold_2940_5

Organism: 13_1_40CM_3_Gemmatimonadetes_66_12

partial RP 18 / 55 BSCG 21 / 51 ASCG 10 / 38 MC: 1
Location: 5406..6722

Top 3 Functional Annotations

Value Algorithm Source
Secretion protein HlyD family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7H9_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 49.4
  • Coverage: 433.0
  • Bit_score: 403
  • Evalue 3.70e-109
secretion protein HlyD family protein; K02005 HlyD family secretion protein Tax=GWC2_Gemmatimonadetes_71_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.9
  • Coverage: 435.0
  • Bit_score: 444
  • Evalue 1.60e-121
efflux transporter, RND family, MFP subunit similarity KEGG
DB: KEGG
  • Identity: 50.9
  • Coverage: 442.0
  • Bit_score: 418
  • Evalue 1.90e-114

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Taxonomy

GWC2_Gemmatimonadetes_71_10_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1317
ATGTCTAAGCGGAACAAGGTGCTGTTGGGAGGTGGAGGGGCCGTGCTCCTGATTGTGCTGGTGATGGTGAGTGCCAGCGCGAAGCGCGACAAGGGCATCGAGGTGCGCTTCGAGACCGTGGGCCGGCGCGACCTCGTCGCGGCGGTCACCGCCAGCGGGAAGATTCAGCCCAAGAAGAAGGTGGACATCAGCGCCGACATCACGGGCCGCATCACGCGGATTGCCGTGCGCGAAGGCGATCTGGTCCAGAAGGGCCAGTTCCTCCTCCAAATCGACCCTACGATCTACCAGGCGAATCTCCAACGGGCGCAGGCAGCGATGTCGCAGGCTGAAGCCGGCGCGGTTCAGGCGCGGGCCACACGCGACCAGTCGACGCGCGCGTTGCAGCGCACCAAGGAGCTGCGCGAGCAGAACCCGAATCTCATCTCGCAGGAACAGCTCGAGCAGGCCCAAACGGCATCCGATATCTCGGAGGCCAACCTGACGGCCTCGCAGCATCTCGTGGAGCAATCGCGCGCCGGGCTGCAGGAGGCGCGCGATCAGCTGGCCAAGACGCATCTCGTCGCGCCGATGGCCGGCCGGGTCACCCGGCTCGCCGTCGAGGAGGGCGAGGTGGCCGTGCCCGGGACGTTCTCGCGCGAGACCGGATTGCTGTTGACGATCTCGGACCTGTCGGTGATTCAGACCAAGGTGCAGGTCGACGAGACGGACGTGGTCCGGCTGCACCTGGGCGACTCGGTCGAAGTCACGATCGACGCCTTCCCGGACACCACCTTCATGGGCCGCGTCACGAAGGTCTCCAACAGCGCCATCCTGACGGCCGCATCGGCCGCCGGCGCCGGCCAGAGCGATCGGGCGGTGGATTACGAGGTCGAGATCACGCTCTCCAATCCGCCGACCGAGGTGCGGCCCGATTTGTCAGCCACCGCGCGCATCGTGACGGATACGCGCAAGCAGGCGCTGGCCATTCCGATTATCGCGCTCACCGTTCGCGAGAACACGCCGATCTCGACGGAGCAAAAGTCGGGGGGTCGCGGGACCGCCCAAGCGGCGATGCCGGCGCGTGCCGACACGGGGCGGCATGGCGGCAATAAGAAGGAAACCGAAGGCGTGTTCCTCGTTCACAGCGGTGTCGCGACGTTCCACCCGGTCAAAGTCGGGATCGCTGGCGAGGAGCACTTCGAGGTCGTGGAAGGCGTGCATCAGGGCGACACGATCGTGGCCGGGCCGTATCAGGCGATTCGCGATCTGAAGGAAGGCGCGCACGTTAAGCCGAGCAAAGAATCGAGCGACACGACCGGCCGGCGCCGCTCATGA
PROTEIN sequence
Length: 439
MSKRNKVLLGGGGAVLLIVLVMVSASAKRDKGIEVRFETVGRRDLVAAVTASGKIQPKKKVDISADITGRITRIAVREGDLVQKGQFLLQIDPTIYQANLQRAQAAMSQAEAGAVQARATRDQSTRALQRTKELREQNPNLISQEQLEQAQTASDISEANLTASQHLVEQSRAGLQEARDQLAKTHLVAPMAGRVTRLAVEEGEVAVPGTFSRETGLLLTISDLSVIQTKVQVDETDVVRLHLGDSVEVTIDAFPDTTFMGRVTKVSNSAILTAASAAGAGQSDRAVDYEVEITLSNPPTEVRPDLSATARIVTDTRKQALAIPIIALTVRENTPISTEQKSGGRGTAQAAMPARADTGRHGGNKKETEGVFLVHSGVATFHPVKVGIAGEEHFEVVEGVHQGDTIVAGPYQAIRDLKEGAHVKPSKESSDTTGRRRS*