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13_1_40cm_3_scaffold_3458_16

Organism: 13_1_40CM_3_Gemmatimonadetes_66_12

partial RP 18 / 55 BSCG 21 / 51 ASCG 10 / 38 MC: 1
Location: 18017..19501

Top 3 Functional Annotations

Value Algorithm Source
putative ABC transporter ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RBG_16_Acidobacteria_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.2
  • Coverage: 492.0
  • Bit_score: 716
  • Evalue 2.40e-203
Putative ABC transporter ATP-binding/permease protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE60_GEMAT id=5223291 bin=16ft_combo_ws3_JS1 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade similarity UNIREF
DB: UNIREF100
  • Identity: 65.7
  • Coverage: 495.0
  • Bit_score: 656
  • Evalue 1.60e-185
ABC transporter transmembrane region similarity KEGG
DB: KEGG
  • Identity: 62.6
  • Coverage: 495.0
  • Bit_score: 613
  • Evalue 4.40e-173

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Taxonomy

RBG_16_Acidobacteria_68_9_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1485
GTGGCGGACAAGAAACCCAAACCCAACTACGCGAACGCATGGCACGAAGCACGCCGGCTCGTCTGGCAGCATCGCCATCGGCTGGTAGTCGGTCTCGCGTTGATGTTGGTCAGCCGGCTCGCGGGTCTTGTGTTGCCGTGGTCGTCTCGGTACATCATCGACCAGGTCGTCGGGCAGAAGCGCGCCGACCTGCTGGGCGTCATCGCGGCAGCAGTCGGCGCGGCGGCCGTCGTGCAGGCGGTGACCTCGTTCGGGTTGTCGCAGATTCTCGGCGTCGCCGCCCAGCGCGCCATCACCGACATGCGCAAATCCATACAAGCATTCGTGTTGCGCTTGCCGATCTCCTACTTCGACTCTACCAAGACCGGCATTCTGATCTCGCGGATCATGACGGATGCGGAGGGCATCCGAAATCTGGTCGGGACGGGGCTGGTGCAGCTGGTCGGAGGCCTGGTCACCGCGAGTATTGCGTTGGGAGTCCTCTTCTGGTTGAACTGGAAGCTCACGGCGATTTCGATTCTCGTGCTCGCTCTGTTCGGCGCGGGCATGGCGTACGCGTTCTCGAAGCTGCGGCCCCTGTTTCGCGAGCGCGGCAAGCTCAACGCTGAGGTGACCGGTCGTCTCGCCGAAACGTTGGGTGGCATCCGCATCGTGAAGGCCTACCGGTCGGAGCGTGGCGAGCGGCTGGTATTCGCGCGCGGCGCCCACCGCCTGTTCCGCAACGTGGCGACCACGATGACCGGCGTCTCCGGCGTCGGCGCGTTTGCGCAGTTCGTGATCGGCGCGATCTCGGTCGTCATGATTCTCGTCGGCGGCCGTGCGGTCCTGTCGCAATCGATGACGCTGGGACAGTTCGTCCAATACGTCTTCTTCGTGGGGCTCGTCGCACTGCCACTGATCAACATCGCCTCGATCGGAACGCAAATCACCGAAGCGTTTGCGGGGCTCGACCGGATCTACGAGCTGCGCCGGATGACGACCGAAGACGCGGAAGATGCCCAGCGCGCGCCGCTCGACGCGGTGCGCGGCGACGTCGCGTTCGAGCACGTGACGTTCGCCTACAAGCCGGGCGTACCGGTGCTCAAAGACGTGTCCTTCCACGCGAGACCCGGCTCGACCACGGCACTCGTCGGCTCCTCGGGGTCCGGGAAGAGCACGCTTATCGGGCTGGTGCTGGCGTTCAACCGGCCCGAGAAGGGCAGGGTGCTGGTGGATGGGCGGGATCTCGCGACGGTGCCACTGGCCGACTACCGCACGCAGCTGGGCGTGGTGCTGCAGGATAACTTCCTGTTCGACGGCACGATTGCCGAGAACATCGCCTTCGCGCGGCCGCACGCGACGCGGGCAGAGATCCAGGCAGTCGCGCGCATCGCGCACTGCGATGAGTTCGTGGACCAGTTCGACGAGAAGTACGACACCGTGGTGGGTGAGCGGGGCGTCAAGTTGTCGGGCGGTCAGCGGCAGCGCATCTCGATCGCGCGCGCC
PROTEIN sequence
Length: 495
VADKKPKPNYANAWHEARRLVWQHRHRLVVGLALMLVSRLAGLVLPWSSRYIIDQVVGQKRADLLGVIAAAVGAAAVVQAVTSFGLSQILGVAAQRAITDMRKSIQAFVLRLPISYFDSTKTGILISRIMTDAEGIRNLVGTGLVQLVGGLVTASIALGVLFWLNWKLTAISILVLALFGAGMAYAFSKLRPLFRERGKLNAEVTGRLAETLGGIRIVKAYRSERGERLVFARGAHRLFRNVATTMTGVSGVGAFAQFVIGAISVVMILVGGRAVLSQSMTLGQFVQYVFFVGLVALPLINIASIGTQITEAFAGLDRIYELRRMTTEDAEDAQRAPLDAVRGDVAFEHVTFAYKPGVPVLKDVSFHARPGSTTALVGSSGSGKSTLIGLVLAFNRPEKGRVLVDGRDLATVPLADYRTQLGVVLQDNFLFDGTIAENIAFARPHATRAEIQAVARIAHCDEFVDQFDEKYDTVVGERGVKLSGGQRQRISIARA