ggKbase home page

13_1_40cm_3_scaffold_447_14

Organism: 13_1_40CM_3_Gemmatimonadetes_66_12

partial RP 18 / 55 BSCG 21 / 51 ASCG 10 / 38 MC: 1
Location: comp(14584..16257)

Top 3 Functional Annotations

Value Algorithm Source
Putative cell surface protein n=1 Tax=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) RepID=A5CP64_CLAM3 similarity UNIREF
DB: UNIREF100
  • Identity: 33.9
  • Coverage: 511.0
  • Bit_score: 186
  • Evalue 5.30e-44
Contig_9, whole genome shotgun sequence {ECO:0000313|EMBL:KIU03959.1}; TaxID=1589899 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Frigoribacterium.;" source="Frigoribacterium s similarity UNIPROT
DB: UniProtKB
  • Identity: 45.4
  • Coverage: 271.0
  • Bit_score: 198
  • Evalue 3.20e-47
wcoG; putative cell surface protein similarity KEGG
DB: KEGG
  • Identity: 33.9
  • Coverage: 511.0
  • Bit_score: 186
  • Evalue 1.50e-44

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Frigoribacterium sp. MEB024 → Frigoribacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1674
GTGCGCTCGCGCCTTTCTCTGCGGTCACCAGCATGGGGTGGTGGATCCTGTCGGAGGGCTCTCTTCGTTCTCCTCGTTGTGGCCGCCAGCTGCGATCGAGCCGAAGCGCCGGTCGAGCCACCGCGGTTCAGCAGCAGCGCCTGGGCGAACGAGCCGGCGGGGTTCACACTACTGTCCGACTACGGATTCGACGATGCCATGTCCGTGGGCGACGGCGTGCCCCTCAGCGACGGATGGTACCTCTATAACCCCGATGGCTTCGCGACACAGACGGCGGATCCGGGGGCGCCGGTCTCGCCGCCGAACGTCGGTCAGTGGCGCTATCCCGTGGGGTTCGGCGGCGGCGCGGCACCGGCGACGATGTACCGCGACCTGGGCGTGCCGCGCGGGGAGATGTATTTCCGCTACTCGTGGAAGGCGAGTAACCCGTGGGAGGGACATCCGACGGGCGTGAACGAAATTTCCTTCGTGATCGCGCAAGGCAACATCCTCGTGGTGGAGATGAACGGCACGCCCGGGGGACCGTACCACCTGATCGTGAATGCGGAGTTCACCACCAGCAACGGTCACCTCGACAATAGCACGGGTGACGATCCCGGCGCGCGCTATCTATTCGGCAATGTGAACGGTGGGAATTACGTCGTAACGCCAGGCCAATGGTACGAGATCGAAGTGTACTTCAACATGAGCACGACGAGCACCTCGCGAGACGGCACCATCCGGTGGTGGGTGAACGGCACGCCGGTCGGGGACTACACCACGGTGAATTTCGACGCCGCCCATCCCTTTGAAGAGTTCGACTTCAGTCCGACGTGGGGCGGCATCGGCAGCTCCAAGACTGAAGAAGACTTCTTCTGGTACGATGACGTGCGGTTAAGCGTGAGATCAGGGGGCGTGCCCCCGGCGCCGGTGGCGAACTTCACGTCGAGCTGTGCGGGGCTGACGTGCAGCGTCGATGCGAGCAGCTCGACGGCGCAGGCCAGTGCGACCTACAGCTGGAGTTGGGGTGACGCCACCAGCGGTACGGGCAAGACGACCTCGCATACGTATGGGGCGGGGGGGACCTACAGCGTGACGCTCAGCGTGACGGATGCGGGCGGCACGAGCACCAAGACGCAGTCAGTGACGGCCACGGCCCCGCCCCCGCCCCCGCCCCCGGCGCCGGTGGCGAACTTTACGTCGAGCTGTGCGGGGCTGACGTGCAGCGTCGATGCGAGCAGCTCGACGGCGCAGGCCAGTGCGACCTACAGCTGGACTTGGGGTGACGCCACGACCGGTACGGGCAAGACGACCTCGCATACGTATGGGGCCGGGGGGACCTACAGCGTGACGCTCAGCGTGACGGATGCGGGCGGCACGAGCACCAAGACGCAGTCAGTGACGGTCACGCCGCCCAACACGGCGCCCACCGTTAGCGCTGGGCCGGATCAGACAGACCTCACCGGTTTGCTCTACACGGAGAGCGCGACCTTTAGCGACCCGGACAACGGGCCGTGGACGTATAGCATCGAGTGGGGCGATGGTTCGTCGCTCACCGGCGCTGCCTCGAGCCAGGGCACGATCAGCGCGGCGCACAGGTACCTCCTGTTCGGTAGCTACACGATCCGTGTAATTGTGACGGACAGCCTGGGCGCCCAAGGTTCGGACACGAAGGTAGTCACATTCATACTGTAG
PROTEIN sequence
Length: 558
VRSRLSLRSPAWGGGSCRRALFVLLVVAASCDRAEAPVEPPRFSSSAWANEPAGFTLLSDYGFDDAMSVGDGVPLSDGWYLYNPDGFATQTADPGAPVSPPNVGQWRYPVGFGGGAAPATMYRDLGVPRGEMYFRYSWKASNPWEGHPTGVNEISFVIAQGNILVVEMNGTPGGPYHLIVNAEFTTSNGHLDNSTGDDPGARYLFGNVNGGNYVVTPGQWYEIEVYFNMSTTSTSRDGTIRWWVNGTPVGDYTTVNFDAAHPFEEFDFSPTWGGIGSSKTEEDFFWYDDVRLSVRSGGVPPAPVANFTSSCAGLTCSVDASSSTAQASATYSWSWGDATSGTGKTTSHTYGAGGTYSVTLSVTDAGGTSTKTQSVTATAPPPPPPPAPVANFTSSCAGLTCSVDASSSTAQASATYSWTWGDATTGTGKTTSHTYGAGGTYSVTLSVTDAGGTSTKTQSVTVTPPNTAPTVSAGPDQTDLTGLLYTESATFSDPDNGPWTYSIEWGDGSSLTGAASSQGTISAAHRYLLFGSYTIRVIVTDSLGAQGSDTKVVTFIL*