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13_1_40cm_3_scaffold_89_5

Organism: 13_1_40CM_3_Gemmatimonadetes_66_12

partial RP 18 / 55 BSCG 21 / 51 ASCG 10 / 38 MC: 1
Location: comp(4423..5268)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5Y4_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 296.0
  • Bit_score: 436
  • Evalue 1.50e-119
RNA polymerase sigma factor; K03086 RNA polymerase primary sigma factor Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.5
  • Coverage: 297.0
  • Bit_score: 490
  • Evalue 1.60e-135
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 296.0
  • Bit_score: 436
  • Evalue 4.20e-120

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 846
ATGGCGAGGTCGAATGGCGGCAAGGCGAAGGCCTTTTTCCGCACCACCCCTTCCGGAGCATTCGACCAGTACCTGCAAGACATACAAAAACTTCCCCTCATCAAAGATCCCGCTGAAGAACGTCGCCTCGCTCGTCGCGTGCAGCGTGGCGATGAAAAAGCCGCCGAGCGTCTCGTCACTGCCAATCTGCGTTTCGTCATCTCCTACGTAAAAAAATATCAGGGCCACGGACTCGATCTCTCCGAGCTCGTCGCGATCGGCAACGAAGGTCTGCTGAAAGCGGTCAAGAAGTTCGATCCCGACCAAGGCGTCAAATTCATTTCGTACGCAGTGTGGTGGGTGCGGCAGGCGGTGCTGAAGGCGTTGGCCGAGCAGACACGGAGCGTTCGCATTCCGCTCAACCAGAATTCGCAGCTCATTCGGATGAGCCGCACCGAGACGTACCTCTCGCAAGAGCTGGGCAGAGAACCCACCGACAACGAAATCGCGCAGGCGTTGGAAGACAGCGTCGAGAACGTGCGCACCGCGCGCCGCATGACGGCGGCGGAGCTGTCGCTCGACGCGCCCGTCGATCGCAGCGGCGAGATCGAAGAGCGCACCGACGGCAAGCTGATGCGCGAGTTCATCGATCGGATCTTCCAGAAGTACCTCACGCCGCGCGAGCGCAAGATTCTCTATCTCTACTACGGACTCGAAGAGGGCAGCGAGGCGATGACGCTCGAGAAGATCGGAGCGCTGATGGGCGTCACGCGTGAGAGAATTCGTCAGATTAGAGAACGGGCATTCGAGAAACTGAGAGAATCGCCCGATGGGAAGGCTCTCAAGGGATTCTGGAGAGCGGCCTAG
PROTEIN sequence
Length: 282
MARSNGGKAKAFFRTTPSGAFDQYLQDIQKLPLIKDPAEERRLARRVQRGDEKAAERLVTANLRFVISYVKKYQGHGLDLSELVAIGNEGLLKAVKKFDPDQGVKFISYAVWWVRQAVLKALAEQTRSVRIPLNQNSQLIRMSRTETYLSQELGREPTDNEIAQALEDSVENVRTARRMTAAELSLDAPVDRSGEIEERTDGKLMREFIDRIFQKYLTPRERKILYLYYGLEEGSEAMTLEKIGALMGVTRERIRQIRERAFEKLRESPDGKALKGFWRAA*