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13_1_40cm_3_scaffold_4356_2

Organism: 13_1_40CM_3_Actinobacteria_66_19

partial RP 10 / 55 BSCG 12 / 51 ASCG 6 / 38 MC: 1
Location: 820..1326

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase ECF-type sigma factor n=1 Tax=Gordonia araii NBRC 100433 RepID=G7H2K2_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 36.9
  • Coverage: 157.0
  • Bit_score: 106
  • Evalue 2.80e-20
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:GAB10077.1}; TaxID=1073574 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia araii NBRC 1 similarity UNIPROT
DB: UniProtKB
  • Identity: 36.9
  • Coverage: 157.0
  • Bit_score: 106
  • Evalue 3.90e-20
RNA polymerase sigma-70 factor, ECF subfamily similarity KEGG
DB: KEGG
  • Identity: 36.0
  • Coverage: 161.0
  • Bit_score: 99
  • Evalue 1.20e-18

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Taxonomy

Gordonia araii → Gordonia → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 507
GTGCAGGCCGACCGGCCCCCATTCGAAGACCTCTACCGGGAATATCTCGGTCGCATCTACGCGTACATCCGGGCGCAGGTCGGCGCGGCCGCCGACGCCGAGGACGTCACCGCGCAGGTCTTCATGAACGCGTACCAGGCCTACGCGCGCTTCGAGCCTCGCAACACCACGCCTGCGGCGTGGCTGTTTAGGATCGCCCGCAACGCGACCCTCGACCACTTTCGGGCGCACGGCCGAAGGGAGCGCTTGCGACGGACCATCGAGCACCAGCCGATGGCGGAGGAAGACCCCGCCGGCCAGGCCGAAGACCGGATCCGCTACCGGGCGTTGCTGGGCCAGGTCGCGCAGCTGCCCGAGCGGCAGCGCGACGCGATCGCGCTTCGTCATTCTGGTCTCAGCTTCGATGAGGTCGGCACGTTGATGGGGTGCAGCGAGGACGCAGCCAAGATGCTTTACCACCGCGCCCTGAAAGCGTTGAAGGACGCGGTACAGAGAGAAGGCGTGTGA
PROTEIN sequence
Length: 169
VQADRPPFEDLYREYLGRIYAYIRAQVGAAADAEDVTAQVFMNAYQAYARFEPRNTTPAAWLFRIARNATLDHFRAHGRRERLRRTIEHQPMAEEDPAGQAEDRIRYRALLGQVAQLPERQRDAIALRHSGLSFDEVGTLMGCSEDAAKMLYHRALKALKDAVQREGV*