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13_1_40cm_3_scaffold_9303_12

Organism: 13_1_40CM_3_Actinobacteria_66_19

partial RP 10 / 55 BSCG 12 / 51 ASCG 6 / 38 MC: 1
Location: 11599..12915

Top 3 Functional Annotations

Value Algorithm Source
branched-chain amino acid ABC transporter periplasmic branched-chain amino acid-binding protein (EC:3.4.22.34) similarity KEGG
DB: KEGG
  • Identity: 31.8
  • Coverage: 437.0
  • Bit_score: 240
  • Evalue 6.90e-61
Branched-chain amino acid ABC transporter n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CW34_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 31.9
  • Coverage: 442.0
  • Bit_score: 243
  • Evalue 3.80e-61
branched-chain amino acid ABC transporter Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 37.9
  • Coverage: 441.0
  • Bit_score: 320
  • Evalue 4.50e-84

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1317
GTGGCGGGCGATTCGATCAGTCAGCGCGAGATAACCCGGAGGCAGCTGCTCGCAGGAGGCGCGGGCGTCGTCGGCGGACTCATCATCGGCGGCGTGGCGGGCAGTGCCCTCGCCCCCAAGTCATCGACAGGCACTGCAAGCGGGTCCCGCGGAAGCGTCAAGGTCGTGGGTATCTTTCCGACCGGCGGCTCGATCGCGTCCGATGGAAAGGAGATGGCCAACGGCGTGAAGATGGCCGTCGACGAGATCAACGGCCGAGGCGGCCTGGTCGGTTATCACCTCGACTACGTCGAGATCGACGACAAGGACTCCTCCACCGACCAGATCACGACCGCCTTCAACCGCGCTGTCAGCGTCGAGAAGGCCGATGTCATCTTCTCGGGCTACCACCTGGCCTCCGGCCCGGAGTTCGACATCGTCGCCAATGCGGGCGCCCTCTACTACAACGTGAACACGCAGATCGCGTGGGTCCAGCGCTACAAGGGAAACCCAAGCAAGTACTGGGGCATCTTCCAGTGCGACCCCACCGAATCCTGGTACGGCCAGGGCTTTGCGTACTGGGTGGACGGCGCCCTGAACGCAGGCCTGCTCAACTCGAGGGTCAAGACCTGCTCGATCATCAGCGGCAAGAGCGCGTACGGCACCGTGATCGCGACCGGCTTCGAGACCCAGATCAAGCAACTCGGCTGGTCTGTGCTCACCAACGACGGCGTTTCGGAAGGCGCGGTGCCCGACTGGGGCCCGGTGCTCTCCAAGGTCAAGCAGGCAAGGCCGACGGTGCTGTTCACCAGCGACTTCTCGCCCGCCGATGACGCGGCCATGGCCAAGGCCTGGGCGGCGAGCCCGACCAAGACCCTCGTCTACCAGCAGTACGGCCCATCGGTCCCCGAGTACCTGAACCTCGCCGGACCGGCCGCCAACGGCATCGTCTGGGCCACCGTGCTCGGGTTGCTGCCCGACAAGATCGGCAACGACTTCCGGTCCCGCTACCAGACCAAGTTCGGCGCCCAGCCCGGTTGGGCCAACGCGGGCGGCTGCTACGACGAGGTCAACGTATGGGCGGCGGCGGTCGCCATGTCCGGTGACCCGAAGAACTACAAGGCGGTCGCCAAGGCCACCGAGTCGGTGATCTGGCGTGGCACGACGGGCTCGATCTCGTTCGTAGACCACACCGGCGTCCAGTTCCCGGCGCAGACGGCGGACGCCTCGATCGGGCAGCCGCACATCATCGTCCAGATCCAGGACGGCGTGCAGAAGGTCGTCTCGCCGACGCCCTTCACGAGCGGCACGTTTGTGTTGCCCACCTGGATGAGGTAG
PROTEIN sequence
Length: 439
VAGDSISQREITRRQLLAGGAGVVGGLIIGGVAGSALAPKSSTGTASGSRGSVKVVGIFPTGGSIASDGKEMANGVKMAVDEINGRGGLVGYHLDYVEIDDKDSSTDQITTAFNRAVSVEKADVIFSGYHLASGPEFDIVANAGALYYNVNTQIAWVQRYKGNPSKYWGIFQCDPTESWYGQGFAYWVDGALNAGLLNSRVKTCSIISGKSAYGTVIATGFETQIKQLGWSVLTNDGVSEGAVPDWGPVLSKVKQARPTVLFTSDFSPADDAAMAKAWAASPTKTLVYQQYGPSVPEYLNLAGPAANGIVWATVLGLLPDKIGNDFRSRYQTKFGAQPGWANAGGCYDEVNVWAAAVAMSGDPKNYKAVAKATESVIWRGTTGSISFVDHTGVQFPAQTADASIGQPHIIVQIQDGVQKVVSPTPFTSGTFVLPTWMR*