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13_1_40cm_3_scaffold_10616_4

Organism: 13_1_40CM_3_Gemmatimonadetes_65_8

partial RP 14 / 55 BSCG 11 / 51 ASCG 5 / 38
Location: comp(3047..3604)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S7M0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 51.4
  • Coverage: 177.0
  • Bit_score: 180
  • Evalue 1.70e-42
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1470558 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus similarity UNIPROT
DB: UniProtKB
  • Identity: 52.5
  • Coverage: 177.0
  • Bit_score: 183
  • Evalue 2.10e-43
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 176.0
  • Bit_score: 180
  • Evalue 4.70e-43

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Taxonomy

Cupriavidus sp. SK-3 → Cupriavidus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
ATGGCGGCGAAGTCCTCTTCCGAAGGGGAACGGTTGGACTCACACGAGCTGGTGCGGTTCGAAACGGTCGCGCTGCCGCATCTCAACGCCGCGTACACGCTGGCGCGTTATCTGACGCGGAATGATCACGACGCCGAAGACGTCGTGCAGGACGCCTATCTACGCGCGCTCAAGTATTTCGGTGGATTTCGGGGTGAGGACAGCAGCGCGCGCGCATGGGTGCTCGCCATCGTCCGCAACACCGCCTACACCTGGCGGCGCCGGCAGCACTCGGACACCCTGGGCACAGAGTTCAACGAGGAGCTGCACAGCGATGCGGTCGCGGACGAGCACCCCGAAGCGACGCTGCTCAAGCGGGATGCCGGAGAATCGTTGACCCGGGCGCTCGACCAGCTCCCGATCGAGTTCCGCGAAGTCATCGTCCTGCGCGAGCTCGAGGGGCTGTCGTATAAGGAAATCAGCGACGTCGCCGGCGTGCCGGTTGGCACTGTGATGTCACGTCTGTCCCGAGCCCGCCAGCGGTTGCAGGAGGCGCTTTGCGCCGCAGAGGAGTGTTGA
PROTEIN sequence
Length: 186
MAAKSSSEGERLDSHELVRFETVALPHLNAAYTLARYLTRNDHDAEDVVQDAYLRALKYFGGFRGEDSSARAWVLAIVRNTAYTWRRRQHSDTLGTEFNEELHSDAVADEHPEATLLKRDAGESLTRALDQLPIEFREVIVLRELEGLSYKEISDVAGVPVGTVMSRLSRARQRLQEALCAAEEC*