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13_1_40cm_3_scaffold_2589_5

Organism: 13_1_40CM_3_Gemmatimonadetes_65_8

partial RP 14 / 55 BSCG 11 / 51 ASCG 5 / 38
Location: 3400..4305

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_13_Acidobacteria_68_16_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 59.3
  • Coverage: 167.0
  • Bit_score: 190
  • Evalue 4.80e-45
RNA polymerase sigma factor id=4427992 bin=GWC2_Ignavibacteria_56_12 species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome similarity UNIREF
DB: UNIREF100
  • Identity: 53.9
  • Coverage: 180.0
  • Bit_score: 178
  • Evalue 1.00e-41
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 52.5
  • Coverage: 179.0
  • Bit_score: 171
  • Evalue 3.50e-40

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Taxonomy

RBG_13_Acidobacteria_68_16_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGCTTGCGCGGGCGCGCGAGATCCTGACGGCGCTCTCGGAAGCCGAGCAAATCGCCGTCATCAACGCGCATCCCCGCATCGGCGAGCGCCCGGACAAAGTGTCGGCTGCTTCCTTCAAAGAGCAGGGGTATCAGGACGACACGACACCGCCGGAAGTCTTCCTGCGGTTGGCGACGCTCAATGACGAGTACGAGGCGAAGTTCGGCTTTCGGTTCGTCGTCTTCGTGAATCGGCGCTCGAAAGAAGCGATCGTTCCCATTCTCGAGTCCCGACTGCGCGGCACGCGCGACGAGGAACGGCGGACCGCCCTGCGAGAGATCCTCGCGGTCGCCGAGGACCGGCAGTTGGCCTTCCAACGAGTCGATCTCGAGCGGCATCATAGCCCCGTGGCGGACGATCTTGTCGCCCGTGCGCAGGCTGGCGACCAGACGGCCTTCCGGGACCTCTACCGTCAGCACGCCGGCCGGGTGTATGCCCTGTGCCTGCGCCTTACCGGCGATGCTTATGCCGCCGAGGAGCGCACGCAGGACGTGTTCGTGCGTCTGTGGGACAAGCTGCGGTTGTTTCGCGGTGAAAGTGCGTTCAGCTCCTGGTTGCATCGTCTCGCCGTCAACGTGGTGATGAACGAGCATCGCACGACGGGGCGTCGCGAGCGGCGCGTGGCGACCACCGAGAACCCGGAAGCACTCGAACGGCACGTTGGACATTCCTCGGAAGGGCTGAGCATCGATCTCGAACGGGCAATTGCCGAGTTACCGGATGGAGCACGCGAGGTCTTTGTGTTGTATGACGTCGAGGGATACGGGCACGGCGAAATCGCTAGTCTCACCGGGATAGCCGAGGGCACGTCGAAGGCGCAGCTGTTTCGCGCTCGCAGGTTGTTACGGGAGAAGTTGGAACGATGA
PROTEIN sequence
Length: 302
MLARAREILTALSEAEQIAVINAHPRIGERPDKVSAASFKEQGYQDDTTPPEVFLRLATLNDEYEAKFGFRFVVFVNRRSKEAIVPILESRLRGTRDEERRTALREILAVAEDRQLAFQRVDLERHHSPVADDLVARAQAGDQTAFRDLYRQHAGRVYALCLRLTGDAYAAEERTQDVFVRLWDKLRLFRGESAFSSWLHRLAVNVVMNEHRTTGRRERRVATTENPEALERHVGHSSEGLSIDLERAIAELPDGAREVFVLYDVEGYGHGEIASLTGIAEGTSKAQLFRARRLLREKLER*